Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01332 ATGAGGGAAGAGGATTCGAATTGGTTTTCGCGATGGGAAGAGGAACTTCCTTCCCCGGAGGAACTTATGCCCCTATCCCAAACCCTAATCACGCCCGATCTAGCCATGGCCTTCGACATCAGAAACCCACACACCACATCAAACCCCAACAACACTTCTCAACAGCAGCAACAACCACCGCAACAACAACCCTCCAACCCTTCCTCCCTCCCCAACCCCCAACAACAACCCTCCTCCGCCGAGTTCGCCGACTCCGGCGAGCTCGGCTCCGGCACCGCCGGCGAGGAACCCGCCCGAACCCTAAAACGCCCCCGCCTCGTCTGGACCCCCCAGCTCCACAAGCGCTTCGTCGACGCCGTCGCCCACCTCGGCATCAAAAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGTTTGACCCGCGAAAACGTCGCCAGCCACTTGCAGAAGTACCGTCTCTACCTCAAACGCATGCAGGGGATTTCCGCTGCCGGTCCCGGCGGCCCCGGCGGTGGCGTCTCCGCGGCCGTCGCCGACCCCGCCACCGACCACCTCTTTGCCAGCTCCCCGGTTCCGGCCCATTTCTTGCACCCCGCCGCCGCCAGGCCGAATTCGGACCACTTCCTGCCGTTTGTGCAGGTGCCGGCCCTCCACCACCACCACCAGCAGCAACAGCAGCTGGCGGCGGCAGCTCAGTACCACCGGCAGGTCGGCCATTTCGGCTCCCCGCCCAACGGGCATTTCGACAACCCCTTCATGTCTAGGCCTAGCCTTCAGAGGATGGCAGGTGGTGGTGGTCCTGTTCACAACCACCACCCTGTTAGTGGGTATGTGGAGGACATGGAATCTGCTAATGCTGCATCCGGAGGTAGAAAGGTTCTTACTCTGTTTCCAACTGCAGATGATTGA 918 0.6133 MREEDSNWFSRWEEELPSPEELMPLSQTLITPDLAMAFDIRNPHTTSNPNNTSQQQQQPPQQQPSNPSSLPNPQQQPSSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISAAGPGGPGGGVSAAVADPATDHLFASSPVPAHFLHPAAARPNSDHFLPFVQVPALHHHHQQQQQLAAAAQYHRQVGHFGSPPNGHFDNPFMSRPSLQRMAGGGGPVHNHHPVSGYVEDMESANAASGGRKVLTLFPTADD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01332 305 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 264 IPR044841 GO:0003700|GO:0006355
Pste5g01332 305 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 156 IPR006447 GO:0003677
Pste5g01332 305 Gene3D - 100 162 - -
Pste5g01332 305 MobiDBLite consensus disorder prediction 248 278 - -
Pste5g01332 305 MobiDBLite consensus disorder prediction 1 102 - -
Pste5g01332 305 FunFam Two-component response regulator 99 162 - -
Pste5g01332 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 159 IPR017930 -
Pste5g01332 305 MobiDBLite consensus disorder prediction 1 18 - -
Pste5g01332 305 Pfam Myb-like DNA-binding domain 107 155 IPR001005 -
Pste5g01332 305 SUPERFAMILY Homeodomain-like 100 160 IPR009057 -
Pste5g01332 305 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01332 Pste-Chr5 8602565 8603482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01332 1 305 G2-like Transcription Factor Family AT3G10760 57.835 1.12e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste5g01332 Myb_DNA-binding 2.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01332 5 8602565 8603482 Pste5g01332 5 8602565 8603482 ECH