Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01329 TCAGATTCTCACAACTCCTCCTTCAGTAAAGTTTCCAACTCAGCCTCAAAAAATGCCTTCGAGCTCGAATTCAAAGCAGCAGAAGAAGAAGCAATCCAAGGTGCACCAACACTCACCATTGCCGTTCAATGCCGCCACGCCTTCCAAAACGCACCACCAACCTTCCGAACTCACCTCTTTATGCGAACAAGCTTCTCGAAAGTTCCCCTCTCTCATCGCCAAATCCGCAATCGTCGCTGAAATCATCCACGTCGACGACACCGTTTACGTTTCCAAGGCCTTCAGAATTTGGCTCTCCGAATCTTCCATGCTCTTTTCCTCTCTCTCCCCCGGCTCCATCGTCTCGGTGTCTATTCCATCTTCGGGGGAGAAAAATTCGCAATTGCATAGTTTTCCTCTCGTGTCGTTAGCTGATGAATGTGACAAATTCTATGGATTGGACTTTAGCAAGGCGGTCAATGATGATGCGGGAAACTACTTTGTGCTTGCAACAGTGTTTCCTTCTAGTAAGGTTTTGAAGAATGGAGTACGATTGTCTTCAAACCTTTCTTGTACCATGGGATGTCCTGCTTTGGGCACAAGTGTGTTTGTTCATCCCATACAATTCTTATCTAGTAGTGCTGCGAATGGGAGCAATGAACAACATTCTACTGAAAATAATTGTCTGTCGATATATAATTGCAAGGAATTATACCTTCAGTTGGTTCCTTCTAAGAATGGGCTACCGATGAAATTTGATAACTTTCCTTTGTTGGACAGGTCTAAGGTGAAATCTCATGTCCGAACTGAGAATGATATTGTTGCTTCTCCTGCTACACCTTCTTATGGATCAAAGTTATCTGATAATAGTGGGCTGTCTTCTCCACTATTTGAACATTCAGCAGCTAGTGTGCCAAATCAGAATAGTCAATCACTAAGTTCATTTGATGTTAGCTTAGCATTAGGGGATGAAAGTTCTAAAAAATTCCTACAGACGTGTGCAAAATCATTTTTGTATTCTCACACTTTACTGCTAGGGAATCTTGTCAATATCCCTACAATGTTTTCAGATTTGTGCCTTTTCCGAGTAATAGAAGTTAAGAAGGAGCAAGTTAGTAGATCTGATCATTATCCATCAAATGGAAGTAGTAATTTATATCCTGAGGATTCTGATATAGCAGATAGTGTAAATCAGGCTTTCATTGTTAACTCTGAAACAGAGGTATTTTTATCTCTTCCATCAAGTTCAGCATCTGAGGAGGCAGTTCAAAGAGATATACCTTGTGTGAAGCAAGAACACAAATTTGCTAATGCTAGCTTAAATGATAAAATCTCTAAACTGGGTGGTCTATCTAAAGAATATACTCTTCTAAAGGACATAATTTCTTCTTCAGCGTATGATGCTTTATCAAGTTTCGGTTTAAGAACGACAAGAGGTGTCCTTCTTCATGGTCCACCTGGTACAGGAAAGACTTCTCTTGCTCAATTATGTGCTCATGATGTTGGAGTCAAAATTTTCCCAATAAATGGACCTGAAATTGTTACCCAATATTATGGGGAAAGTGAGCAAAAATTGTATGAAGTTTTTGATTCAGCCATTCAAGCTGCACCTGCTGTGGTTTTCATTGATGAATTAGATGCAATTGCCCCTGCAAGGAAAGAGGGAGGTGAAGAGCTATCTCAAAGATTGGTTGCAACTTTACTGAATCTGATGGATGGAATTAGTAGAACTGAAGGGTTACTTGTAATTGCTGCTACTAACCGACCTGACCATATTGAGCCAGCTCTCAGACGACCGGGAAGATTTGACAAGGAAATTGAAATTGGTGTACCATCCCCCAAACAACGTTCAGATATTTTGCTCAATCTTCTCAGTGAAATGGATCACTCTCTCTCAGAATTACAAATTGAACACCTTGCCACAGTCACTCATGGTTTTGTGGGTGCTGATCTAGCTGCTCTTTGCAATGAGGCAGCCTTGATTTGTCTACGACATTATGCTAATTTTGAGAAGACTTATGATTCTTGTTCTGATTATATAACAGAGCAACCTGTTCTGGTGAATGGTGAAACGAACTCAATAGATCATTTGGGTGATGCAACTTCATCTGTTTCTGATATGTCACTGGCCTCTAGCCGTGTATTGCCTTCCTGCATGATGGGAATGACTCCTGAAACTATGGAAATAATTCCTGATAGTGGTGAAGAGCAGTTTTTGAAAATAAGCTTTGAAGATTTTCAGAAGGCTAGGATGAAAATAAGACCTAGTGCCATGAGAGAGGTAATCCTTGAGGTTCCAAAGGTTAATTGGGAAGATGTTGGCGGTCAAAGGGAGGTCAAAGCTCAATTGATGGAAGCTGTTGAATGGCCACAAAAACACCATGATGCATTCAATCGTATTGGAACCCGCCCTCCTACAGGTGTATTGTTGTTCGGGCCTCCAGGTTGTAGTAAAACCCTCATTGCACGTGCAGTTGCTTCTGAGGCAGGGCTGAACTTTCTTGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGTGAATCTGAGAAAGCAGTCAGATCGCTATTTGCAAAAGCAAGGGCAAATGCCCCATCAATAGTATTTTTTGATGAAATAGACAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAACTTCTTGTTGAGTTGGATGGTCTTCATCAAAGAGTTAATGTTACTGTCATAGCTGCAACAAATAGGCCAGACAAGATTGATCCTGCCCTTCTAAGGCCAGGACGCTTTGATCGTCTGCTATATGTTGGACCTCCAAATGAGGTGGACAGGGAAGAGATATTTCACATTCATCTGCGAAAAATCCCATGTGGTTCTGATGTTAGCCTTAAAGAACTAGCTCGACTCACAGATGGTTGTACTGGGGCTGACATATCATTGATATGTCGTGAGGCAGCTGTTACAGCAATTGAGGAGAGCCTTGATGCTTCAGTTATAACAATGAAGCATTTAAAGATGGCAATCAAACAGATCCAGCCATCAGAAGTTCACTCCTACCAAAAGTTGTCAACGAAATTCCAAAGGGCAGTCCACTGTTGTGATATAAAGGATGAATTCCGTCGTATGCAGTGCAACAGTAGATCTTCTCGGTTCAACATTTGGACGTTCATAAAGTCTTGCACAGTGTTCCTCTATCAGATTCCTGTTGTCATCTTTAATTTGAGAACTGTTCGAAGTAGATAACCACGGTCCTCAGAGAACTATTATGTTTGTCAAATTCCAGTAACTGGGTTCATGTACATTATAAGGATCATCTGTACAGTAAGCTGGCTAGATTTTAAGCCTTTATTTAAAGTATGAGTGCTGTATGTATGTGGCACCAGTAATGGAGATCAATGTTTTCAACAGAGGAGTCAGGGAAGAGAAAAAAAGTGTAATTGCCCAATTTTTGCAGAAAACCTCCATGACTGAATCATGGTCAGCTTTTCGGTTGGAAGATGAACATATTTTGACAATGATTACCAACATGGTCTCACGTGAGTTTTGCTTGCATGTTACTTTTGAAGGGGAGAAGTAACTGTCGTTTGAGTGAGGAACTAGGCCATCCGTATCTTTGCGTCATTTTCAACTGCCAATTTTCGGTAGTTCTGGGCCACTCAAGGCTTTTACACAAAATCATAAATTAAGAAGTTTGTTGCTAAAACTTACATAGTTAGAGGAATATGTACATTATATTGACGGAGAGCACTGCGAATACAGATTATCCTGTTTTGACAAATTCAATGCGTTATGATGTACATGTACCCCTTGAGTATTTTGAGCACACTCAACTTGTAATGTCACAAAAGTTGAAGATGAAATTTATTGACCAGAAGATGAGAACCTGATTTTTGTCAGGATATTTTATTTTATTTTTATTGCGAATCGTTCAAAAGTTTCTTTTCTGAAAAGTTGATTTTGTTAACTTTTTATAGTCACTGCGTTATTGACACATCATTGTTTATTATTAATGCTATTATTAG 4008 0.4027 MPSSSNSKQQKKKQSKVHQHSPLPFNAATPSKTHHQPSELTSLCEQASRKFPSLIAKSAIVAEIIHVDDTVYVSKAFRIWLSESSMLFSSLSPGSIVSVSIPSSGEKNSQLHSFPLVSLADECDKFYGLDFSKAVNDDAGNYFVLATVFPSSKVLKNGVRLSSNLSCTMGCPALGTSVFVHPIQFLSSSAANGSNEQHSTENNCLSIYNCKELYLQLVPSKNGLPMKFDNFPLLDRSKVKSHVRTENDIVASPATPSYGSKLSDNSGLSSPLFEHSAASVPNQNSQSLSSFDVSLALGDESSKKFLQTCAKSFLYSHTLLLGNLVNIPTMFSDLCLFRVIEVKKEQVSRSDHYPSNGSSNLYPEDSDIADSVNQAFIVNSETEVFLSLPSSSASEEAVQRDIPCVKQEHKFANASLNDKISKLGGLSKEYTLLKDIISSSAYDALSSFGLRTTRGVLLHGPPGTGKTSLAQLCAHDVGVKIFPINGPEIVTQYYGESEQKLYEVFDSAIQAAPAVVFIDELDAIAPARKEGGEELSQRLVATLLNLMDGISRTEGLLVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPKQRSDILLNLLSEMDHSLSELQIEHLATVTHGFVGADLAALCNEAALICLRHYANFEKTYDSCSDYITEQPVLVNGETNSIDHLGDATSSVSDMSLASSRVLPSCMMGMTPETMEIIPDSGEEQFLKISFEDFQKARMKIRPSAMREVILEVPKVNWEDVGGQREVKAQLMEAVEWPQKHHDAFNRIGTRPPTGVLLFGPPGCSKTLIARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEVDREEIFHIHLRKIPCGSDVSLKELARLTDGCTGADISLICREAAVTAIEESLDASVITMKHLKMAIKQIQPSEVHSYQKLSTKFQRAVHCCDIKDEFRRMQCNSRSSRFNIWTFIKSCTVFLYQIPVVIFNLRTVRSR 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01329 1058 FunFam Putative vesicular transport protein (CDC48) 407 585 - -
Pste5g01329 1058 ProSitePatterns AAA-protein family signature. 886 904 IPR003960 GO:0005524|GO:0016887
Pste5g01329 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 644 IPR027417 -
Pste5g01329 1058 Gene3D - 403 585 IPR027417 -
Pste5g01329 1058 PANTHER AAA-FAMILY ATPASE 242 1005 - -
Pste5g01329 1058 Pfam AAA+ lid domain 938 983 IPR041569 -
Pste5g01329 1058 Pfam AAA+ lid domain 611 641 IPR041569 -
Pste5g01329 1058 Gene3D - 917 987 - -
Pste5g01329 1058 CDD RecA-like_CDC48_NLV2_r1-like 422 584 - -
Pste5g01329 1058 FunFam calmodulin-interacting protein 111 isoform X1 741 916 - -
Pste5g01329 1058 CDD RecA-like_CDC48_r2-like 755 914 - -
Pste5g01329 1058 FunFam spermatogenesis-associated protein 5-like protein 1 917 1000 - -
Pste5g01329 1058 Gene3D - 745 992 IPR027417 -
Pste5g01329 1058 SMART AAA_5 780 918 IPR003593 GO:0016887
Pste5g01329 1058 SMART AAA_5 452 588 IPR003593 GO:0016887
Pste5g01329 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 742 993 IPR027417 -
Pste5g01329 1058 FunFam Calmodulin-interacting protein 111 587 744 - -
Pste5g01329 1058 MobiDBLite consensus disorder prediction 19 40 - -
Pste5g01329 1058 Pfam ATPase family associated with various cellular activities (AAA) 784 915 IPR003959 GO:0005524|GO:0016887
Pste5g01329 1058 Pfam ATPase family associated with various cellular activities (AAA) 456 585 IPR003959 GO:0005524|GO:0016887
Pste5g01329 1058 Gene3D - 587 744 - -
Pste5g01329 1058 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01329 Pste-Chr5 8587201 8600102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01329 1 1044 Calmodulin-binding Proteins AT3G56690 54.435 0.0 1007