Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01327 CATATTCACATTCACTCCCCGACACCGAGAGAGAGAGAGAGAGAGAGAGAGGTTCTTCTTCCGCCCCGATTTGTTTTTGTCATACTTTGACCAAAGAAGAATTTCCCAAATGGCTTCAAGAGCAATTTCTCAACAACAAGGAAGAGGTGAAGCGGTTGTAGGGGGAGGAAAACAGCAGAAGAAGAATGGTGTAGCAGATGGAGGAAACCGTAAGGCATTAGGTGAGATTGGAAATTTGGCCAATGCAAGAGGAATTGAAGTCAAAACAAATCGTCCCATCACAAGGAGTTTTGGTGCCCAACTACTTGCCAAGGCACAAGCAGCGGCAGCTGCAGAGAATCACAAGAAACAAATTTGTGCCAATGTGGCTGGTCCTCCTGCAGTTGCTAATGGAGGAGTGGCTAAAAAAGTGGTACCTATACCGGTTCAGAAGAAAGTCATCGCAAAACCAAAGCCTGAGGAAGTCATTGAGATTGAAGCTAGCCCAGACAAGGAGATTCAGAAAGACAAGAAAAAGGAAGGAGGTGGCAAACCCAAGAAGAAATCCACTCTTACTGCAGCACTCACGGCTAGAAGCAAGGCAGCATGTGGCATAACTAACAAACCAAAGGAGAATATTATTGACATTGATGCTGGAGATATCGACAATGAACTTGCTGCTGTGGAGTATATTGATGACATTTACAAGTTCTATAAACTTGTTGAGCATGAGAGCCGCCCCCGTGACTACATAGACTCACAACCTGAGATAAATGAGAGGATGAGAGCTATACTTGTTGATTGGCTCATAGATGTTCACACCAAGTTTGAACTTTCACTTGAGACCCTTTACCTGACCATCAATATAATTGATCGGTTCCTAGCAGTTAAGACTGTTCCAAGGAGGGAACTGCAATTGGTTGGCGTTAGTGCCATGCTGATGGCAGCTAAGTATGAAGAAATCTGGCCCCCGGAGGTTAATGACTTTGTCTGCCTCTCAGATAGGGCTTACACTCACCAACAGATACTGGCCATGGAGAAAATCATTCTGGGCAAGCTGGAATGGACTTTGACTGTGCCCACCCCATTTGTTTTTCTAGTTCGTTTTATCAAGGCATCTGTCCCAGATCCAGCGTTGGAATGCATGGCACATTTTCTGTCAGAGTTGGCAATGATGAATTACGCCACCTTAATCTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAACAAGACTCCCTTTTGGAATGAGACTCTTAAGCTGCACACGGGTTACTCACAAGAACAACTTATGGAGTGTGCTAGATTATTGGTGAGCTTCCACTCAACTATTGGAAATGAAAAGCTTAAGGTTGTGCAAAGGAAGTATTCTGATCCTCAGAAGGGAGCTGTTGCTGGGCTCCCACCTGCTAAATATCTTCTGCCTGAAGGTTCCTCCCAATAGAGTTAAAGAAGCAAATGGGAAGAAGCAGTGAGAGAGTTTTTGT 1487 0.4479 MASRAISQQQGRGEAVVGGGKQQKKNGVADGGNRKALGEIGNLANARGIEVKTNRPITRSFGAQLLAKAQAAAAAENHKKQICANVAGPPAVANGGVAKKVVPIPVQKKVIAKPKPEEVIEIEASPDKEIQKDKKKEGGGKPKKKSTLTAALTARSKAACGITNKPKENIIDIDAGDIDNELAAVEYIDDIYKFYKLVEHESRPRDYIDSQPEINERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRELQLVGVSAMLMAAKYEEIWPPEVNDFVCLSDRAYTHQQILAMEKIILGKLEWTLTVPTPFVFLVRFIKASVPDPALECMAHFLSELAMMNYATLIYCPSMVAASAVFAARCTLNKTPFWNETLKLHTGYSQEQLMECARLLVSFHSTIGNEKLKVVQRKYSDPQKGAVAGLPPAKYLLPEGSSQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01327 444 SUPERFAMILY Cyclin-like 316 436 IPR036915 -
Pste5g01327 444 Gene3D - 204 315 - -
Pste5g01327 444 Pfam Cyclin, N-terminal domain 190 314 IPR006671 -
Pste5g01327 444 SMART Cyclin_C_2 317 434 IPR004367 -
Pste5g01327 444 FunFam G2/mitotic-specific cyclin 203 310 - -
Pste5g01327 444 MobiDBLite consensus disorder prediction 123 148 - -
Pste5g01327 444 MobiDBLite consensus disorder prediction 123 143 - -
Pste5g01327 444 Pfam Cyclin, C-terminal domain 317 432 IPR004367 -
Pste5g01327 444 ProSitePatterns Cyclins signature. 219 250 IPR006671 -
Pste5g01327 444 Gene3D - 190 429 - -
Pste5g01327 444 SUPERFAMILY Cyclin-like 179 314 IPR036915 -
Pste5g01327 444 SMART cyclin_7 321 403 IPR013763 -
Pste5g01327 444 SMART cyclin_7 224 308 IPR013763 -
Pste5g01327 444 PIRSF Cyclin_A_B_D_E 1 444 IPR046965 GO:0016538|GO:0044772
Pste5g01327 444 CDD CYCLIN_AtCycB-like_rpt1 180 312 - -
Pste5g01327 444 MobiDBLite consensus disorder prediction 1 45 - -
Pste5g01327 444 FunFam G2/mitotic-specific cyclin-1 311 429 - -
Pste5g01327 444 PANTHER CYCLINS 137 422 IPR039361 -
Pste5g01327 444 CDD CYCLIN_AtCycB-like_rpt2 317 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01327 Pste-Chr5 8574852 8577337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01327 1 438 Core Cell Cycle Gene Families AT4G37490 51.974 2.02e-146 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01327 5 8574852 8577337 Pste5g01327 5 8574852 8577337 ECH