Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01325 CCCATTTCCAAACGCAAACACAGTTTCGTTTCCCATAGTTATGCCAAAAAATAAAAAGGAAAAGCTAAAGAGGAGAAAGAAGCTTTCAATGCTTTTATTGACTCAAAGCATTCAAAGGTTCCTTAGATTGTAGTAAAAAAGAAAAACTCAGCAATGGCGGTTACTGTTCATGTCCCCAGCCATTCCTCAACTCTCTGCTTTTCTTCCCCTAAAAACAAAAGGCAATTCCTCATTCCCTTCTTTCAATTCTTTATCTCTGAGTTCTCTACTGCTTTCCTCAACCGAATTCACCGAGCAATTTTATTATTGTTGTTGCGGAGGAGAGGCGGCATGGGGAGTAGGGTTAGGCAGGGGACGAGGTTGCAGAAAATGATGAAGTGTGTTTGCCTGAGGGAGCAGTTGGAAGGAGAAGATGAACCTGTTCCTTCCTCGGACTCTCTTGCAATCAGGGAATTTTATTCTTCTACAGCAAGTGGGCGTTCTGGCTTTGATGGCGAAATTGAGATGATGGGGTCGGATTCTAGGAACATTGATGAGGCTGAATTGTCCTTGCGTGAGAGTGGCATCTTGGACAACGAGGAAGCTAGAGCTTTGTTAGGAAAAGATGAATATCAGGAAGGGAATATAGAAGCTGCTTTACGTGTTTATGAGAGAATAAATATAGGCGCTTTGACTTCCAAGATGAAAATTTCCCTTGCCAAAATCAGAGATCGCCGCAAGAATCATTCTCATTACTATGCTACTCCCCCAATGTCCATATACACGGCTGGATTGCTGTTGGAAGCAATTTTCCTAAAAGCTAAATGCTTGCAGGTTCTAGGGAAGTTTAAAGAAGCTGCTCAGGCTTGTAAAGTTATTCTGGACATAGTCGAGTCCTCTTTACCTGAAGGTTTGCCTCAAAACTTCGGTGATGAGGGTAAATTGCAGGAGACTTTGAGTGAAGTAGTTGAGTTACTTCCAGAATTATGGAAACTTGCTGATTCTCCCCGTGATGTTATTTTGTCTTATCGGCGCGCACTTCTTCGCCAATGGAATCTTGATGCAAAAACCATAGCTAAGATTCAGAAAGAATTTGTTGTTTTTCTTTTATATAGTGGAGGGGAAGCAATCCCCTCAAATCTTCGTTCCCATATGGACAGCTCCTTTGTACCCAGAAACAACTTAGAAGAGGCTATACTTCTTTTAATGATTTTGCTAAGAAAGATATGTTTAAATAAAATTGAGTGGGATCCGTCAATTTTGGATCACCTTTCATTTGCCCTATCTGTTTCAGGGGATTTGACAGCTTTAGCCAATCAATGGGAAGAATTACTCCCTGGGACTATCAATAGAAGGGAAAGGTACCATGCCTTAGCTCTTTGTTATTATGGCGCAGGGAATGACTTGGTAGCACTGAATCTTCTTAGGAAATTGTTGAGTAGTAGAGAGGACCCAAAACACGTTCCTTCTTTGTTAATGGCTTCTAAGATTTGTTGCGAGAACCCTGATCTTGCAAAAGATGGGGCAAGCTTAGCTCGCAAAGTGCTTGAAAACTTGGATGGAAGATGTGATCAATTGAAAAGTCTTGCCGGTTGCTTACTTGGTGTTTCACTTTCAACACACTCAAAATTTGCTATTTCTAATTCTGAGAGGGCTGAAAGACAATCTGAGGCACTTCATTCCTTGAAAACTGCAAGCAAAGTGACCCAAATCAGTAATCCCCTTGTAATATTCTATTTGAGTTTAGAATGTGCTGAGCAAAGGAAATTGGATGATGCACTTCATTATGCAACATGTTTTTTAAATTTGGAAATTGGGTCTAATGTTAAAGGGTGGTTATTGTTAGCTCGGATATTATCAGCTCAAAAACAGTTTTTGGATGCTGAATCTATTGTTAATGAGGCTTTAGATCAGACAGGAAAATGGGATCAAGGAGAGTTACTGCGAACAAAAGCTAAACTACAAATTGCACAGGGCCAGTTGAAGAGTGCCATTGAAACATACACTCAAATTCTTGCTATTCTCCTAGTTCAGAGAAAGACTTTTGGTTCAAGGAAGAAGCTGTACAAGGACTACATAGATCATGCTAGGAACTTGGAAGTGGAAATATGGCATGATCTTACTTACGTATACATAAGTCTGTCGAGGTGGCATGATGCAGAGGTGTGTCTTTCGAAATCCAAGGCCATCAAACTATACTCTGCTTCTAGATGTCATGCAATAGGTACAATGTACGAAGCAAAGGGCCTTTACAAAGAGGCTCTAAAAGCTTTTCATGATGCTTTGAACATTGATCCTAGACATGTCCCTAGCTTGATTTCTACTGCGGTGGTTCTTAGACTGTGCAGTAATCGATCAAATCCTGCTATCAGAAGCTTTCTGATGGATGCACTACGGCATGACAGATTTAATGCTTCTGCTTGGCATAATCTTGGCATTTTCCACAAGGATGAGGGTACAATCCTAGAAGCTGCAGATTGTTTTGAGACAGCAAACTTTCTTGAAGAATCGGCTCCTGTTGAACCTTTCAGATGACTGTCTCTGAAATCAGTTTGCTATACAATCTCAATCTTTTGATATATTCATGTACCAACACTCTTTAACACTGGCACACTATCTCCTATTAGGTAAAAGTCAGGTGAGTTTCATTTTCTGTTTGGCGGGTCTTATTAAAAAATTAGTAGGATCCACGTAAAATCTTGAGCAATAGGAAAATGTGATAGAAAAATGTTAGTGTATATGTAATGTGTTACTGACACTCCTTGTTCATGTATAATAGCTTCGAGCTAACGACAGTATAGTTCAATAAGAAAAGCACGCTTCATGATGGGG 2811 0.4016 MAVTVHVPSHSSTLCFSSPKNKRQFLIPFFQFFISEFSTAFLNRIHRAILLLLLRRRGGMGSRVRQGTRLQKMMKCVCLREQLEGEDEPVPSSDSLAIREFYSSTASGRSGFDGEIEMMGSDSRNIDEAELSLRESGILDNEEARALLGKDEYQEGNIEAALRVYERINIGALTSKMKISLAKIRDRRKNHSHYYATPPMSIYTAGLLLEAIFLKAKCLQVLGKFKEAAQACKVILDIVESSLPEGLPQNFGDEGKLQETLSEVVELLPELWKLADSPRDVILSYRRALLRQWNLDAKTIAKIQKEFVVFLLYSGGEAIPSNLRSHMDSSFVPRNNLEEAILLLMILLRKICLNKIEWDPSILDHLSFALSVSGDLTALANQWEELLPGTINRRERYHALALCYYGAGNDLVALNLLRKLLSSREDPKHVPSLLMASKICCENPDLAKDGASLARKVLENLDGRCDQLKSLAGCLLGVSLSTHSKFAISNSERAERQSEALHSLKTASKVTQISNPLVIFYLSLECAEQRKLDDALHYATCFLNLEIGSNVKGWLLLARILSAQKQFLDAESIVNEALDQTGKWDQGELLRTKAKLQIAQGQLKSAIETYTQILAILLVQRKTFGSRKKLYKDYIDHARNLEVEIWHDLTYVYISLSRWHDAEVCLSKSKAIKLYSASRCHAIGTMYEAKGLYKEALKAFHDALNIDPRHVPSLISTAVVLRLCSNRSNPAIRSFLMDALRHDRFNASAWHNLGIFHKDEGTILEAADCFETANFLEESAPVEPFR 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01325 786 PANTHER PROTEIN NPG1 74 786 IPR043376 -
Pste5g01325 786 ProSiteProfiles TPR repeat profile. 677 710 IPR019734 GO:0005515
Pste5g01325 786 SUPERFAMILY TPR-like 496 669 IPR011990 GO:0005515
Pste5g01325 786 Pfam Tetratricopeptide repeat 678 710 IPR019734 GO:0005515
Pste5g01325 786 SUPERFAMILY TPR-like 588 773 IPR011990 GO:0005515
Pste5g01325 786 SMART tpr_5 209 242 IPR019734 GO:0005515
Pste5g01325 786 SMART tpr_5 551 584 IPR019734 GO:0005515
Pste5g01325 786 SMART tpr_5 587 620 IPR019734 GO:0005515
Pste5g01325 786 SMART tpr_5 643 676 IPR019734 GO:0005515
Pste5g01325 786 SMART tpr_5 747 780 IPR019734 GO:0005515
Pste5g01325 786 SMART tpr_5 677 710 IPR019734 GO:0005515
Pste5g01325 786 Gene3D Tetratricopeptide repeat domain 498 781 IPR011990 GO:0005515
Pste5g01325 786 Gene3D Tetratricopeptide repeat domain 121 476 IPR011990 GO:0005515
Pste5g01325 786 SUPERFAMILY TPR-like 209 428 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01325 Pste-Chr5 8571798 8576860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01325 74 786 Calmodulin-binding Proteins AT4G28600 55.021 0.0 726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01325 5 8571798 8576860 Pste5g01325 5 8571798 8576860 ECH
Pste5g01325 5 8571798 8576860 Pste4g01805 4 13472616 13479247 PCT