Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01320 AAATAAGATTGAAGAGAAAGGGCACTCTAAACCCCTTTCAAGTTTCAACGCTATCTATCCATCCATTATCAGCTCAGAGTGTGAGCACTGAGCACTGAGCAATTGCAATGGCCACTGCTCCTTCGCTTCTACACTCATCAGCCTCCTCTTTTTTCCCCCAATTTCGCGCATTTCCATCCTCTGCTTCTTATTCACTGTTTCCTCATGCAGTGGTGTCTGTGAAGGCCTCTGCTTCCGGGGTCGTGTTGGTGGAGAAGTCTGATGCAGAGAAAGCCAATAGGCTCAAAGCAGCTTACACCCACAAAATTGTTCCCTTGCTCATGGAAGACTTCTCTTACACCAACAAACACCAGGTGCCTAAAATTGAGAAGATTGTGGTTAACTGTGGTATTGGAGATGCTGCTCAAAATGCAAAGGGTTTGGAAGCGGCAATAAATGATCTAGCAATGATCACAGGGCAGAGACCTATTAAGACTCGAGCCAGGGCTTCTCTTGCCACCTTTAAGATCAGGGAAGGTCAACCGCTTGGGATTGCCGTGACATTAAGAGGAAATATGATGTACTCATTCCTAGACCGAGTTATCAACTTGGGACTTCCTAGGACAAGAGATTTCCAAGGTGTGAATCCCAACAGCTTTGATGGGCATGGGAATTACAGCATTGGCATTAAAGACCAAGGTGTGTTCCCAGAGATCAGAGCTGAAGTTGTTGGTAAGCCTAGGGGAATGGATATCTGCATCGCAACCACAGCTAATACTGATCAAGAAGCGCAGAAATTATTGTCTCTTATGGGTATGCCCTTCAGAGAGGGAGGTGGTGCTCTTGCCACTGCAGTCCGGAAAAAGAAGCTCAAGTCTCATCATTTTGACGCAAAATCAAAGGGAGGAAAAGGAAGGAAGTGACAGTTTTGATGCAATATCATAGGATAAAAGGAACTAATGTTTACCAGAATAGACTGTGTTGTATTCCTTCTTTCATTCAAATGTAATGTTAATATATTGTTAATTCTTTTTGTAAGAGGCATGGATATGCCATCAGCTGTCACTTAAAGGTTATGTGCTCATGCAGATCTTGCTAATTAATTTCCATTATTTCTTGATCGGTTCAATGAACAATTATTTTAGTGCGTGCG 1132 0.432 MATAPSLLHSSASSFFPQFRAFPSSASYSLFPHAVVSVKASASGVVLVEKSDAEKANRLKAAYTHKIVPLLMEDFSYTNKHQVPKIEKIVVNCGIGDAAQNAKGLEAAINDLAMITGQRPIKTRARASLATFKIREGQPLGIAVTLRGNMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRAEVVGKPRGMDICIATTANTDQEAQKLLSLMGMPFREGGGALATAVRKKKLKSHHFDAKSKGGKGRK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01320 264 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 61 234 IPR002132 GO:0003735|GO:0005840|GO:0006412
Pste5g01320 264 SUPERFAMILY RL5-like 58 233 IPR022803 -
Pste5g01320 264 FunFam 50S ribosomal protein L5 55 234 - -
Pste5g01320 264 Gene3D - 50 234 IPR022803 -
Pste5g01320 264 Hamap 50S ribosomal protein L5 [rplE]. 56 234 IPR020930 GO:0003735|GO:0005840|GO:0006412
Pste5g01320 264 ProSitePatterns Ribosomal protein L5 signature. 112 128 IPR020929 GO:0003735|GO:0005840|GO:0006412
Pste5g01320 264 Pfam Ribosomal protein L5 79 135 IPR031310 -
Pste5g01320 264 Pfam ribosomal L5P family C-terminus 139 232 IPR031309 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01320 85 189 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 26.667 6.43e-06 43.9