Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01314 CTTGGCTAAAGCTAAGAGTTGAAGACTTCACTATTCATGGTTTCCCTCAACCCAAACCTTTCACCTCTTCGAAGACCCTTTTCTCATGGACTATCAGAATAACAAGGTCAGAAAGCCTTATACCATTACCAAGTCCAGAGAGAACTGGACCCACCTGGAGCATGACAAGTTTCTCGAAGCTCTTCACTTATTCGACCGTGACTGGAAGAAGATTGAAGCGTTTGTAGGTTCAAAAACAGTTATCCAGATAAGGAGTCATGCACAGAAGTATTTTATGAAAGTTCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCCCGTCCCAAGAGAAAAGCTGCTCATCCATACCCCCAAAAAGCATCCAAAAATGCTCTTACTTTGTCCCAAGTTACACGCCCATTGCAATCTTCATCTGCTCTATCTGAATCATCATACATTTATAGGACAGACTCATCATCTGTGCTTAGAAGACCAGTTAGCATTGTGCCATTGCCATCTTGGGGCTATAATGTTAGACCACCAGTCAATTATATGGTGTTGACTCAGCAAGCCATTCCTTTCAATTACTGCAATAGCAGTACTAATGAGAGCAATCCTAGGGCTTGGCCAAGTAGCAAACAGACAGATAAAGCTGACCAAAGCTATGCAATTAAAGTAATGCCAGATTTTGCCCAAGTCTATAGCTTCATTGGCAGTGTGTTTGATCCAAATGCAACTAATCATCTACAGAGGCTGAAACAGATGGACCCAATAAACTTTCAGACCGTATTGCTGTTGATGAGGAACCTCTCCTCCAACTTAAGGAGTCCTGAATTTGTGAATCATAGAAGATTGCTGTCATCGTACAATGCTAACTTGGAGAAGGCAACATCCAGTAGTCATCGCAGCCCATCCTTCGCTGAAAGATCAGAGTGTGTGGTTTTATCTGCTTAAGGTGTTACTGGTGGTTTCTTATAAACATAAATTTTAAATATTTTCCAAAAACACACTAAGCTTTCCTCTCAGCTACCACTAACTCCAAATGGCGAAGTACGGGGCATAAGAGGGACAAGATTACAGGTTTTACTAACAGTTGGCAGGGTGCAAATACTTGCATGTGCACGTGTGTAATTTACTGTCCTTTAGGCTTAAGTTATGTGTGTATCTGATAAAGATGGTTATCCTACGAATGCAGGATAATGGTCCTGCTGTTTTAACCTGTAGGCTGTACTGTACAGAATACAGAGCTTTTGTGTGTAATGTTATGTTTTTTTCTACAATTTAGTGTACAAGACCTGTCTATGACTTAGGAGGTGCTGCCTGTATTGTATATAAAACAAAGAGCATATATAAATTCTGCTTATTTCATG 1350 0.4067 MDYQNNKVRKPYTITKSRENWTHLEHDKFLEALHLFDRDWKKIEAFVGSKTVIQIRSHAQKYFMKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNALTLSQVTRPLQSSSALSESSYIYRTDSSSVLRRPVSIVPLPSWGYNVRPPVNYMVLTQQAIPFNYCNSSTNESNPRAWPSSKQTDKADQSYAIKVMPDFAQVYSFIGSVFDPNATNHLQRLKQMDPINFQTVLLLMRNLSSNLRSPEFVNHRRLLSSYNANLEKATSSSHRSPSFAERSECVVLSA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01314 282 MobiDBLite consensus disorder prediction 68 91 - -
Pste5g01314 282 ProSiteProfiles SANT domain profile. 16 69 IPR017884 -
Pste5g01314 282 FunFam protein REVEILLE 6 isoform X1 20 68 - -
Pste5g01314 282 SUPERFAMILY Homeodomain-like 12 68 IPR009057 -
Pste5g01314 282 Gene3D - 20 68 - -
Pste5g01314 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 67 IPR017930 -
Pste5g01314 282 PANTHER SWI/SNF COMPLEX-RELATED 5 254 - -
Pste5g01314 282 Pfam Myb-like DNA-binding domain 18 63 IPR001005 -
Pste5g01314 282 CDD SANT 20 63 IPR001005 -
Pste5g01314 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 16 65 IPR006447 GO:0003677
Pste5g01314 282 SMART sant 17 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01314 Pste-Chr5 8506171 8511740 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste5g01314 Myb_DNA-binding 5.4e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01314 5 8506171 8511740 Pste5g01314 5 8506171 8511740 ECH
Pste6g01991 6 9291201 9297252 Pste5g01314 5 8506171 8511740 ECH
Pste5g01314 5 8506171 8511740 Pste6g01991 6 9291201 9297252 PCT