Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01307 AATCCTTTGCCAGCTTCTCCTTTTCTCGTTCTTCTCTCTCTCCTTTCTCTCTCTCTCTCTCCCCACAGTCTATACTTTTTGATTTGTGGAATTACTCTTGTTCCTACCTGGTTCAGCACAGCCTCCTCAATCTCCTCCTCTTGTTCTTTCTCTTTTTGTTTTTTTATAATAAAAAGATTCAGTTTTGTGTGTTGTTGCTTGTACCCATTTGCTTTTTGTGTTCTGGGTCAATGCTGTCATGCTCTCTGCAAAATAGGGCTTCAATCAGCTGTCTGGGGTGATTGATTCTGGTTTTGTGTTAAAAAGGAATGTAGTTGGAGAAGGTGGTGTGTATTTTGAATAATAAAAATTTCATCTTCATTGTTGGGGATGTTACAAATTTTGTAAATTCAGCACTTTTTTTTTATTTGCCCCTAATCCTGGATTTGTTCCATATCCCCCTTTCACGGTTAATCGGACGAATAGATTGGGAAATCCCATTGGATTTGAGTGGATTCTCCAATAAAGGTTGGAAATTTTGACCTGGTGGACCCCTTTGGGCACAAAATTAGGTGGTGAAATTGGGAACGAATCTGAGCAGAAAGGCTCGCTGTAGTTACTGGGTGTAGGTGTATTGAAGGTCTTTTAAGATGGATCATGTTATTGCTGGCAAATTTAAACTGGGAAGGAAAATTGGGAGCGGGTCTTTTGGGGAGCTTTACATAGCTGTTAATATACAAACTGGAGAGGAGGTGGCTGTCAAGCTGGAACCTGCGAAGACCAAGCATCCCCAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGAGTAGAGGGAGACTACAATGTTATGGCAATTGATCTTCTTGGACCAAGTCTGGAAGATTTGTTCAATTATTGCAACCGGAAATTAACATTGAAGACAGTGTTAATGCTTGCTGATCAATTAATCAACAGAGTTGAATATATGCATTCTAGAGGTTTCCTTCACCGTGACATTAAGCCTGACAATTTTTTAATGGGCCTAGGACGGAAAGCAAACCAGGTGTATATCATCGATTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGTTCTATATTTTGTCTTTCTTGCACAGGGAAAACAAGAACCTTACAGGCACAGCTCGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAGGCTGGTACCAAGAAACAAAAGTATGATAAAATTAGTGAGAAGAAAATGTCAACTCCAATAGAGGTGCTTAGCTGGATCATGGTGGCATTTGGATAA 1370 0.4044 MDHVIAGKFKLGRKIGSGSFGELYIAVNIQTGEEVAVKLEPAKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMAIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYSSIFCLSCTGKTRTLQAQLEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTPIEVLSWIMVAFG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01307 246 ProSiteProfiles Protein kinase domain profile. 9 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01307 246 Pfam Protein kinase domain 10 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01307 246 Gene3D Phosphorylase Kinase; domain 1 2 85 - -
Pste5g01307 246 SMART serkin_6 9 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01307 246 Gene3D Transferase(Phosphotransferase) domain 1 86 242 - -
Pste5g01307 246 PANTHER CASEIN KINASE-RELATED 8 238 - -
Pste5g01307 246 SUPERFAMILY Protein kinase-like (PK-like) 4 238 IPR011009 -
Pste5g01307 246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pste5g01307 246 FunFam Putative Casein kinase I 1 85 - -
Pste5g01307 246 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01307 Pste-Chr5 8471621 8475804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01307 6 234 CBL-interacting serine-threonine protein kinases AT4G24400 27.273 3.82e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pste5g01307 Pkinase 1.5e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01307 5 8471621 8475804 Pste5g01307 5 8471621 8475804 ECH
Pste5g01307 5 8471621 8475804 Pste4g01823 4 13613561 13614742 PCT