Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01306 CGACAGTGGACAAACACAGGGTTCTAACTTCTAAGTGTGCGGCAATGCCTCACCGTAAGAACCCTGCGCCTCTCCCCCTCGTCGTTACCCTAAACTGCATCGAAGACTGTTCCCTCGAGCTCGAATCCCTCGCCAGCGTTGCCAATAGCTGAGCTAGTATTATTCTCTCTAAATCCCCAGTCCCAAGTTCGCAACTCGCTACACCCAGGCTAATGTTTGAAAACACAAATGACTTTGAACTTTGATGTTTTCTGCAGCTTTAATCAGAGTATCAAGGCCTGGGTTTTCCTGCACATTCAATAGAGATAGCTTATTCTGGTTATGCTGTCTAGTTGAACATGTTCCAAGGATTGCATCATCTCCTCCCACAACTTCATATTTCTGTTCTTTTACTTCTTACAAGTGCATACATCAAGGAAATTACAGAACACCGAGGCATTTTTCAGGAGCTCCTTCATTATCGTCTCTATCAGATTTTGTTTTAATGCAGAGATCAAATATCTTTGGAAGCTATAATATTCTGGGAATCTGGCTCCCAGCCAGATACATAAGTAATGAATCTGTTGAGCTGAAGATTGACAAGGATGCTATACGGTTCTCTCTGGACAAGTCCGATGATGTTAATTCTACAAAGAGCCAGAAGAAAAAAATAATTAAAATGTCTAGAAAGGCTAAAGTGAATGAGCTCAGGTTCTACCGTTTGAAGGCCAAGAAAAAGATGAATTCCCCAAATCCAGAAGTTAGAATTAGATATAAGCTTGAAAAGGCGAAGCGAAAGGAAACTTGGTTGATTGAGAAGCTAAGAAAATTTTATGTGCCAAAACCCCTTCCAGAAACATTTGATCCTGAAATTATAACTGAGGAGGAGAGGCATTACCTGAAGCGCACTGGTGAGAAAAAGAAACATTATGTTCCAGTTGGGAGACGAGGAGTGTTTGGTGGGGTAGTTCTTAATATGCATCTTCACTGGAAAAATCATGAAACAGTAAAGGTTATCTGCAAGCCTTGCAAACCAGGGCAAGTTCATGAATATGCGGAAGAGCTTGCTCGACTGAGCAAAGGCATTGTGATTGACATCAAGCCCAATAATACTATCATCTTTTACCGTGGAAAGAACTATGTACAACCAGAAGTAATGTCTCCTCCAAATACATTATCAAAAGCAAAGGCCTTGGAGAAATATAGGTATGAGCAGTCCCTTGAGCATACGAGCCAGTTCATTGAAAGATTGGAGAAAGAGCTTGAAGAGTATCATGAGCACCTTGCAAAATTTAAAAAAGGGAAAGAGGATACTGCTAAAGATGGAAAACTCTCTAATGGCCAAATGATTGCTGTGAAAAGACTGGCAAGGAATTCTGGCCAAGGAGACTTGGAATTTAAGAATGAAAAAACACAATTGAATTGGGATAGACGGTATAAAATTATTGGAGGTGTTGATCTATGTCTTCTTTATCTCCACAAGAATTCTCGATTGTGCATTATACATTGTGATCTCAAACCAAATAATATTCTCTTGGACGAAGAGATGATTCCTAAGATATCATATTTTGATATGGCAAGATTAATTATTGCATGGAGAAACTGGGAAGAGGGGACAGTTACAAATATTATAGGTCCTTCATTAAACAATAATTCACAAAATAAAATAATAAGATGCATCCACATTGGTTTACTTTGTGTTCAAGAAAATTTAGTCAATAGATCAACCATGGCCAAGGTTGCTCTCATGCTTAATTGTTATTCTACCGTTCCCCCAGTGCGTTCAAATCCTGCATTTTTTATTGACGATGCAACTAGAAGTCTTCCAAACATGTCATGGGGAGTTAATTCAGGGGAAACAAGATCGAGCCGGCCAACAACTAAATCAGCTCACGAGACAACCAACGAAGCTTCACTTAGCGAACTGCTTTTCTTTTTTTATTGCCTCCTTGTCCTTGTAATAATGGTAATATCTGAAGCCAAGTTCCTCCCAAGTTTCGACAAGGGCATCTGTAACTACACAGCCAATAGGGTCTATCTCAGCAACCGGGACACCCTTTTATCCAACCTTTATTCCGATGAAAAAATCGACTATGGTTTCTACAATTTGTCATATGGTAACAACCCAGACAAAGTATACGGCATTGGGTTATGCAGAGGAGATGTTAAGCCACACGAGTGCCGAAGCTGCCTAAACGATTGTAGAGACAATCTCACACAGCAGTGTCCTTACGAAAAGGAGGCAATTTGGTGGGGTGAAAAGTGCATGCTGCGCTACTCCAACCGCTTAATATTTGGCATCATGGAAACTTATCCTGCGGAAGATATGGGCAACGTAAACAATGCATCGGATGCAACTGAGTTCAATAGGGTGCTGGGTGACTTACTTAGAAATCTAAGATTCAAAGCTGCATCAGGTGACTCTCGTAGTAAGTATGCCGCGGATACTGCAGTTGTTACCAATTTTGAAACCATATATGGTCTAGTGCAGTGTACACCTGACTTGTCAACCCAGGACTGCGCTAATTGCTTGGATTGGACCATTAAAGATATCCCACGCCTTGTTAAAGACAAGGTTGGTGCTGTCATGCTTAGACCCAGTTGTACTGTTAGATATGAAATCTACGCCTTCTTCACTAACGCCACCATTAATGACCCTGCTCTACCCCCACAACCACAAGGAAATGACAATTCATTGCGAACAATAATAATTGTCATAGTTTTATCTATTATTATTGTTGTTGCTCTCATAATTTTCTTTAGCATATGTTTTAGAAGGCGGAAAGGAGGCAAACATCTTTTAAATGATGATGAAGACAACGATGAAATAGAATTGGCTGAATCACTGCAATTCAACTTAAACACAATAGAAGTTGCAACAAATAACTTCTCTAATAGTAATAAACTCGGAGAAGGCGGGTTTGGAGCTGTTTATAAGGGCAGGCTCTCTAATGAACAAGTAATTGCTGTCAAAAGGTTATCAAGTAGTTCTGGCCAAGGAGGCATGGAATTTAAGAATGAAGTTCTTTTATTGGCCAAGCTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTTAGTTTGGAAGGAAAAGAAAAGTTACTTGTTTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTCTTATTTGATCAAACAAAGAAAACACAATTGGATTGGGATAGACGCTACAAAATCATTAGAGGTATTGCTAGAGGCCGTCTTTATCTTCATGAGGATTCACGATTACGCATAATACATCGGGACCTCAAAGCAAGCAATATTCTCTTAGATGAAGAAATGCTTCCTAAGATATCAGATTTTGGCATGGCAAAACTTATTATTGCAGATCAAACACAAGAAAATACAAGTAGAGTTGTTGGAACCTATGGATATATGGCACCCGATTTTGGTGTACTAGTTCTTGAGATTGTAAGTGGTCAAAAAAATCACAGTATTCATCACGAGGAAAACGTGGAAGATTTGTTAACCTTTGCATGGAAGAACTGGCAAAATGGGACAATTACAAATATTATAGATATAGCATTGCTCAAAAGTTCACAAAATGAAATAATAAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGCCAATAGACCAATCATGGCTAATGTTGCACTTATGCTTAATAGTTGTTCTATTACTCTCCCAGTGCCTACAAAACCTGCATTTTTTATGGATAGTGCAACTATAAGCCTTCCAAACATGTCATGGGAAGTCAATTCATGGGCAACAAAATCGAGTCAATCCGCAAATAAATCGACCCATGACTTGGTAGGAGAGACTTCAATTACTGAGTTAAACCCTCGC 3817 0.3917 MFSAALIRVSRPGFSCTFNRDSLFWLCCLVEHVPRIASSPPTTSYFCSFTSYKCIHQGNYRTPRHFSGAPSLSSLSDFVLMQRSNIFGSYNILGIWLPARYISNESVELKIDKDAIRFSLDKSDDVNSTKSQKKKIIKMSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLRKFYVPKPLPETFDPEIITEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPEVMSPPNTLSKAKALEKYRYEQSLEHTSQFIERLEKELEEYHEHLAKFKKGKEDTAKDGKLSNGQMIAVKRLARNSGQGDLEFKNEKTQLNWDRRYKIIGGVDLCLLYLHKNSRLCIIHCDLKPNNILLDEEMIPKISYFDMARLIIAWRNWEEGTVTNIIGPSLNNNSQNKIIRCIHIGLLCVQENLVNRSTMAKVALMLNCYSTVPPVRSNPAFFIDDATRSLPNMSWGVNSGETRSSRPTTKSAHETTNEASLSELLFFFYCLLVLVIMVISEAKFLPSFDKGICNYTANRVYLSNRDTLLSNLYSDEKIDYGFYNLSYGNNPDKVYGIGLCRGDVKPHECRSCLNDCRDNLTQQCPYEKEAIWWGEKCMLRYSNRLIFGIMETYPAEDMGNVNNASDATEFNRVLGDLLRNLRFKAASGDSRSKYAADTAVVTNFETIYGLVQCTPDLSTQDCANCLDWTIKDIPRLVKDKVGAVMLRPSCTVRYEIYAFFTNATINDPALPPQPQGNDNSLRTIIIVIVLSIIIVVALIIFFSICFRRRKGGKHLLNDDEDNDEIELAESLQFNLNTIEVATNNFSNSNKLGEGGFGAVYKGRLSNEQVIAVKRLSSSSGQGGMEFKNEVLLLAKLQHRNLVRLLGFSLEGKEKLLVYEFVPNKSLDYFLFDQTKKTQLDWDRRYKIIRGIARGRLYLHEDSRLRIIHRDLKASNILLDEEMLPKISDFGMAKLIIADQTQENTSRVVGTYGYMAPDFGVLVLEIVSGQKNHSIHHEENVEDLLTFAWKNWQNGTITNIIDIALLKSSQNEIIRCIHIGLLCVQENLANRPIMANVALMLNSCSITLPVPTKPAFFMDSATISLPNMSWEVNSWATKSSQSANKSTHDLVGETSITELNPR 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01306 1191 Pfam CRS1 / YhbY (CRM) domain 204 288 IPR001890 GO:0003723
Pste5g01306 1191 FunFam Cysteine-rich receptor-like protein kinase 10 837 950 - -
Pste5g01306 1191 SUPERFAMILY Protein kinase-like (PK-like) 356 501 IPR011009 -
Pste5g01306 1191 SUPERFAMILY Protein kinase-like (PK-like) 861 1164 IPR011009 -
Pste5g01306 1191 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 383 441 - -
Pste5g01306 1191 Gene3D - 203 300 IPR035920 -
Pste5g01306 1191 FunFam Os07g0541700 protein 375 457 - -
Pste5g01306 1191 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 576 676 - -
Pste5g01306 1191 Pfam Salt stress response/antifungal 692 786 IPR002902 -
Pste5g01306 1191 Pfam Salt stress response/antifungal 583 673 IPR002902 -
Pste5g01306 1191 MobiDBLite consensus disorder prediction 1170 1191 - -
Pste5g01306 1191 ProSiteProfiles CRM domain profile. 202 299 IPR001890 GO:0003723
Pste5g01306 1191 FunFam cysteine-rich receptor-like protein kinase 10 951 1137 - -
Pste5g01306 1191 Gene3D - 579 675 IPR038408 -
Pste5g01306 1191 Gene3D - 684 789 IPR038408 -
Pste5g01306 1191 SMART CRS1_YhbY_2 204 288 IPR001890 GO:0003723
Pste5g01306 1191 Coils Coil 319 346 - -
Pste5g01306 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pste5g01306 1191 ProSiteProfiles Protein kinase domain profile. 261 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01306 1191 Gene3D Transferase(Phosphotransferase) domain 1 375 457 - -
Pste5g01306 1191 Gene3D Transferase(Phosphotransferase) domain 1 951 1137 - -
Pste5g01306 1191 Gene3D Phosphorylase Kinase; domain 1 842 950 - -
Pste5g01306 1191 ProSiteProfiles Gnk2-homologous domain profile. 682 789 IPR002902 -
Pste5g01306 1191 SUPERFAMILY YhbY-like 203 298 IPR035920 -
Pste5g01306 1191 ProSiteProfiles Protein kinase domain profile. 875 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01306 1191 SMART serkin_6 875 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01306 1191 ProSitePatterns Protein kinases ATP-binding region signature. 881 903 IPR017441 GO:0005524
Pste5g01306 1191 FunFam Cysteine-rich receptor-like protein kinase 10 684 789 - -
Pste5g01306 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Pste5g01306 1191 ProSiteProfiles Gnk2-homologous domain profile. 573 676 IPR002902 -
Pste5g01306 1191 Pfam Protein kinase domain 876 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01306 Pste-Chr5 8463983 8483385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01306 444 514 Receptor kinase-like Gene Family AT4G21410 54.930 2.83e-18 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste5g01306 Pkinase 9.9e-35 CL0016