Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01303 ATGGATTCAGCAAGGAGTTGGTTACAAAAGTTTCAGCCACGTGATAAACTAAGAGCCTCTACGAGAAAGAAAGATGATACTCATGGCGGAAATGAAATTCCAAATGTGCCTATGGATGACGCAACTCATTCTAATATCACAAAACAAAAGGTTGCAGCAGCCAAGCAATACATTGAGAACCATTATAAGGAACAAATGAAGAACCTTCAGGAAAGGAAGGAACGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTTTCTGAGGAAGATCAAAATAACCTACTCAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGTCTTCAAAGGCACAAAATGGGTGTTGATGATTTTGAGTTATTAACTATGATTGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGTAAGGAAAAAGCTACAGACCATGTATATGCGATGAAAAAACTAAAGAAGTCAGAGATGCTTCGTAGAGGCCAGGTGGAACATGTCAGAGCTGAAAGGAATCTCCTTGCAGAGGTTGACAGTAATTGCATAGTTAAACTTTATTGTTCTTTTCAAGATGAAGAGTATCTATATCTTATTATGGAATATCTACCGGGTGGGGATATGATGACTCTACTCATGAGAAAGGATACCTTAACTGAAGATGAAGCTCGATTTTATGTGGGAGAAACAGTTTTAGCTATTGAATCTATACATAAACACAATTATATACACAGGGATATTAAGCCTGATAACTTATTACTTGATAAATATGGACACTTAAGATTGTCAGATTTTGGACTATGTAAACCATTAGATTGTAGCACACTTGAAGAAGCGGATTTTTCTACAAGTCAAGATGCGAATGGACCTACACAAAATGGTGGTGAATACACAGCTCCAAAACGCACACAACAAGAACAATTGCAACATTGGCAAAAAAATAGAAGGACACTCGCTTATTCCACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTTTTAAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGTGCTATTATGTATGAAATGTTAGTAGGTTATCCACCTTTTTATTCTGACGATCCAATGTCAACATGTAGGAAGATAGTAAATTGGAAATCACACTTAAAATTTCCTGAAGAAGTAAGGTTAACTCCAGAGGCTAAAGATCTTATAAACAAGCTTTTGTGTAGTGTTAACCAAAGGTTGGGCTCAAATGGTGCATATGAAATAAAGGCTCATCCATTCTTTACTGGTGTTGAATGGGACAAATTGTATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGATACTCAAAATTTTGAAAAATTTGAAGAGTCTGACAGTCAAACTCAATCATCATCAAGAGCTGGTCCGTGGAGGAAGATGCTTTCATCTAAAGACATGAACTTTGTGGGATACACATATAAGAATTTTGAAATTGTTAACGACTATCAAGTTCCCGGGATGGCTGAATTGAGGAAGAAAACCTCTAAAGCAAAGAAGCCATCCGTTAAGTCCCTATTTGATTGTGAGTCTGAGACATCTGAAACATCTGAGACTTCAGATTCCACTGCAAGCTTAACTAAGAAGCATGATGATCTACCTACTCAGCCTGAATAG 1641 0.3723 MDSARSWLQKFQPRDKLRASTRKKDDTHGGNEIPNVPMDDATHSNITKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCKEKATDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLEEADFSTSQDANGPTQNGGEYTAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEVRLTPEAKDLINKLLCSVNQRLGSNGAYEIKAHPFFTGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEESDSQTQSSSRAGPWRKMLSSKDMNFVGYTYKNFEIVNDYQVPGMAELRKKTSKAKKPSVKSLFDCESETSETSETSDSTASLTKKHDDLPTQPE 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01303 546 MobiDBLite consensus disorder prediction 279 301 - -
Pste5g01303 546 FunFam Non-specific serine/threonine protein kinase 318 437 - -
Pste5g01303 546 MobiDBLite consensus disorder prediction 1 43 - -
Pste5g01303 546 MobiDBLite consensus disorder prediction 9 30 - -
Pste5g01303 546 SUPERFAMILY Protein kinase-like (PK-like) 93 473 IPR011009 -
Pste5g01303 546 MobiDBLite consensus disorder prediction 515 531 - -
Pste5g01303 546 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste5g01303 546 SMART serkin_6 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01303 546 Gene3D Phosphorylase Kinase; domain 1 118 448 - -
Pste5g01303 546 Pfam Protein kinase domain 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01303 546 Gene3D Transferase(Phosphotransferase) domain 1 204 437 - -
Pste5g01303 546 CDD MobB_NDR_LATS-like 54 115 - -
Pste5g01303 546 CDD STKc_NDR_like 118 483 - -
Pste5g01303 546 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Pste5g01303 546 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste5g01303 546 MobiDBLite consensus disorder prediction 501 546 - -
Pste5g01303 546 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Pste5g01303 546 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Pste5g01303 546 ProSiteProfiles Protein kinase domain profile. 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01303 546 MobiDBLite consensus disorder prediction 532 546 - -
Pste5g01303 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pste5g01303 546 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pste5g01303 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 471 - -
Pste5g01303 546 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01303 Pste-Chr5 8430432 8437687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01303 1 515 AGC Kinase Gene Family AT2G20470 78.095 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pste5g01303 Pkinase 5.3e-63 CL0016