Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01301 CGTTTCTTAGATTAAATAAATCCCATAATAATTAAAAATATACCAAAGAAAGAGAGAGGGAGCACACACCCAAACACTCTCGCTTCTCTTTTTCTACGTTTTTCTTTTTCTTCCAACCATTGCGTCTGTTTGATCAAAGTCAAACCACACCAATAAAAGACCACCATTCTTCCCAAACACAAACTCCCCTTTTTCTCTTCTCTCCCTTTCAACACAACTGGTTTTTCGTTTGCACAAACAAGACCCAGTTTCTTGAGCACGCGGTATTTGTTTGTTGTTTGTCCCCTCCCTTCAGCATTTTACGCATAGGTACAACGAAACAAACAAACAAAATTTAATTTCAAGATTTATTCACCGATTAATTTTCCGCGGCCCAATTTTGTTTTTATTTTCATACAAAGGGGTCTTTTCTTTTTTTTTTCCCGAGGTTTTTCCTTTGCAGCGCATGAAACGCAGCACAACAACGTTGTTTCTTGTTGTCATTTACTCACGCAAGCGTGTTGGTGTTCGTTTCTTGTTTCTGTAGCTATCCAATTTCTCCCTTTATACCCAAAGCATGTTTATCCAGTTCCCTTCTTGCGCCGAACATTAATCAAATCTAATTTTGCCAAAACGGAACAACCCGCAAGAATAATCTCAGTAAATTTGCGAACTTTAATAACTGATTGCCGAAATTTTTTTACCCTTTTGACCCTTGATTATTGCTGTGTTCAGGGATCAAGGCAACAGCATCCAAGTGACGATCACATTGATGAGAATCCAAATTTGAGTTTCAAATTTTGGATCTGCGAGGATGAAGTCTTGGTCAGTGGAGGAGTGGAGGAAGTATTTTGGGTCTGCGAATTCGGACATATTTGAGATAATTGAGCATGCGATAATTGTGGCAGCTTCCGATTGTCCGAAAGAGTTTAGAGTGAGGAGAGATGGGATTGCGGAGAAGTTGTTCTCTTGCAGGTTGACTCGGTGTGTGGGGTGTGACCGTGTGGAGTTGGCTGTGGCTGGGGGTGATAAAGAGCAAGGTGATGGTGATGATGATGATGATGATGATGATGATAGACGTTGCAAGATTGGGTTTGAAAGAGATGGGGTTGCAGGGGCAAGCAAAGAGAGCAAGGTCAATGGGGATGTTGGGAGGGATGTTAACGGCGTTAGCAATTATAGTTTTGGAGAGGCCGAGGCTTTGAGTGATGAGATGGAAGAGCAGTCTCAGTATGTAGGGGAGATTTTGAGGATCAGAGATGTTTTGCTTAACCGTGAAGATGAGAGTTTTGGAAAATGGGTTTTTGACTTTTTCAGCCACAAAGAAATGTGCTTTTTGTTGGATGGCATTTTGTCTGAGTCTGTGTTATTTGATTCACTTAGAAGGCTTCAGCTGATGGAACTCACTGTAGATTGTCTCAAGGCAACTGAAATTGGCAAGGCTGTCAATCCTCTCAGAAAACATACATCTAAGGATATTCGTCAACTAGCAAACACGCTCATTGATGGCTGGAAAGAATTGGTGGATGAATGGATCAAGACCACTACTACCACAGCAATTGCGAGTTCAGAAGAAGGTACACCAGATTCAGTAAATCCATCTGTTGTTGATGACGACGACGAAGAAGATGGACTTCCATCACCTCCCATGGATGAAGGGGCTTTCTTCGTTACTCAAACTGGCTCCATGGAACTTTCACAAACTGACTTCGAGTTCTTTCGGTTGGATGTCACATTTCTCGATGATGTAAAGTTCTTTGATGGCATGGATGACGATGGAAATCCTCGACCAAGTCGTCCATCAAACAAGAACCATGAGAATGCCAGAAAGCCTACTTCTGGCAGTCATGTTATAGAGAATAGGAAGTTTCAGGCTTCCCATGAGACAGCCATCACTAACAGGGATGTAAAGAATCAGCAACCTAAAAACAATGAGACTGTTGTGTCTGTGAGACCAAATAAACCAGTTAATTCTGGGCCTGGCAGACCTCCAAAATCAAATGTGCAGAGAAAGAGTAATGTGGAGCCAAATATGCAACATGTACAGAACAATTCGATCACAAAGAGGCCATCCATTGGTCATCTAGATAAATCCATGCGATCAGATGATGCGGCTGTCCAGGTGAAGCTAGAAGTCACCAAGAGGAAACTTCAGGAGAGTTATCAACAAGCTGAAAATGCCAAGAGGCAGAGGACAATACAAGTAATGGAAATAAATGAGCTTCCCAAACAAGTTGTACAGCGACATTCTCATTTCAAACCTGGATATCACAATAGGAATGCTCGAAGATAAAGCTATTATTCTATGGTGGACCTGGAGATTTAGCAGCATTTCAGAGCTGATTGTTCTATGGATTGAAGATACAGGTCCACTTGACTGTAGAAAATAACAATATCCATTCACCATTTTGGATTTGCATAAAATTATTCCAATTGAGAGGGAAGTAAACCGTGAAACGCTGGTTATTTCCCAATTTATAGGAGTTCCCAGTACATAGGAATTTTGTTAAAATCTTAGATTGGATTTAGAAGAGGAACCTAAGTTGGCACCTCTACTTTTGACTTGCTTCCATAATGATTGTCTATAGAAATCTCAATTGTTTCTGGACATTTTTCTTCTCACATAGGACTTACTAGGGCCTCATATATGTAGTTAGTAGTATATATATATATATATATATATATACCCTTTGGAAGTGCTTTGTCACAACCTCAATGGTCTTTAAACTCTTAGATATGATTATGTCAGCAGGTGTAAAACAATTTTAATCAGCA 2754 0.4038 MKSWSVEEWRKYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDGIAEKLFSCRLTRCVGCDRVELAVAGGDKEQGDGDDDDDDDDDRRCKIGFERDGVAGASKESKVNGDVGRDVNGVSNYSFGEAEALSDEMEEQSQYVGEILRIRDVLLNREDESFGKWVFDFFSHKEMCFLLDGILSESVLFDSLRRLQLMELTVDCLKATEIGKAVNPLRKHTSKDIRQLANTLIDGWKELVDEWIKTTTTTAIASSEEGTPDSVNPSVVDDDDEEDGLPSPPMDEGAFFVTQTGSMELSQTDFEFFRLDVTFLDDVKFFDGMDDDGNPRPSRPSNKNHENARKPTSGSHVIENRKFQASHETAITNRDVKNQQPKNNETVVSVRPNKPVNSGPGRPPKSNVQRKSNVEPNMQHVQNNSITKRPSIGHLDKSMRSDDAAVQVKLEVTKRKLQESYQQAENAKRQRTIQVMEINELPKQVVQRHSHFKPGYHNRNARR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01301 492 ProSiteProfiles TFIIS N-terminal domain profile. 170 240 IPR017923 -
Pste5g01301 492 MobiDBLite consensus disorder prediction 317 406 - -
Pste5g01301 492 MobiDBLite consensus disorder prediction 248 283 - -
Pste5g01301 492 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 132 251 IPR035441 -
Pste5g01301 492 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 5 483 IPR044805 -
Pste5g01301 492 CDD TFIIS_I 177 238 - -
Pste5g01301 492 MobiDBLite consensus disorder prediction 389 406 - -
Pste5g01301 492 Coils Coil 436 463 - -
Pste5g01301 492 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 181 245 IPR035441 -
Pste5g01301 492 MobiDBLite consensus disorder prediction 346 382 - -
Pste5g01301 492 SMART TFS2_5 169 239 IPR003617 GO:0005634
Pste5g01301 492 Pfam TFIIS helical bundle-like domain 189 237 IPR017923 -
Pste5g01301 492 MobiDBLite consensus disorder prediction 317 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01301 Pste-Chr5 8418988 8423063 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pste5g01301 Med26 1.2e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01301 5 8418988 8423063 Pste5g01301 5 8418988 8423063 ECH