Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01260 ATTTGTTCATGGAGCTTCTTCACAATCTCAGTATTCTCATCACAATGCTGCTTCTATGCATGTTGCCTCACTCACTCAAGTGCCAACAAACATACCTTAATGACACTGTTTATGATTGTTCTGGTAACCCTTCTGCACCAAAAGGGTACCTTTGCAATGGTCTTCACAAGTCATGCACTTCCTTTTTACTTTTCAGGTCAATACATCCCTATGATAACCCTGTCAGCATTGCTTACCTTCTTGGCTCTGAAGCATCTAACATAGCCTCAATCAACAACATCTCAAGAAATGAGAAGGTTGCTTCCAATAAGTCAATCATTGTTCCTGTATTCTGTTCATGTAATGGAAACATTTACCAGCACAACACACCTTACACTGCCATCAAGAATGACACCTATTATGAGTTGGTAAAAGAAACCTTCCAAGGCCTCACCACCTGCCAGGCAATGATGGGTCAGAATTACTATGCCCCAATAAACATTGCAATTGGTGCTGAGCTCACAGTTCCAATGTTATGTGCTTGTCCAACTGAAAATCAGACATCAAGAGGGGTCACCTCCTTGCTGGTTTACAGGGTGAACTATGGTGACAATATTAAGTCCATAGGAAGGGCTTACGGCCTGGACGAACAAAGTGTGCTGGAGGCCAATGAGTTAGCAGTGCCAATAAGTGCTAACAGAAGCATGACACCAATTTTAGTTCCTCTAATAGGGAAGAACTGCAAAGAGAACCCAGATAAATTCTATTGTAAATGTTACCAAGGATCGGATGGAAGCTCGAAAGGGCTCTTCTGTGATGAATCTGATGGTCAGAAATTCCCTGCCAAATTGGTTGCTGGTTTAGGAGTTGGAATTGGTGTAGGCTTTCTGTGTTTGTTTCTTTTGGGGCACAAATCATATCAACACATACGGAAGAAGAGAACCAGTATCCGTAAGGAAAAGCTATTCAGGCAAAATGGTGGCTACTTGTTACAAGAGAAGCTCTCTCTTTATGGCAATGGAGAAATGGCAAAGCTTTTCAAAGCCGAGGAGCTGCAGAGAGCAACAGATAACTACAACAAGAGTAGGTTTCTTGGTCAGGGAGGCTATGGCACAGTGTATAAAGGAATGTTACCAGATGGCACCATAGTTGCTGTTAAAAAGTCAAAACAGATTGAAAGGAACCAGATAGAGACTTTTGTAAATGAAGTGGTCATTCTCTCCCAGATCAACCACAGGAACATTGTCAAACTATTAGGTTGTTGCCTTGAGACGGAAGCTCCATTACTAGTCTATGAATTCATTCCCAATGGAACACTTTCTCACCATATCCATAAGAGAGACAATGATTCCTCCCTTCCATGGGACAGTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTGGCATATATGCATTTTGCAGCTTCTATTCCCATTTTCCATAGAGACATTAAACCCACCAACATACTTTTAGACAGTAACTACAGTGCCAAAGTGTCAGATTTTGGAACATCAAGATCAGTCCCACTAGATAAGACTCACTTAACCACAGCTATAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTCAATTTTCAGACAAAAGTGATGTTTATAGTTTTGGGGTTGTTCTTGTAGAGCTCATTACTGGAAAAAAGCCTGTTTCATTCTTAGAGGAAGATGACGGTCAGAATCTGATTGCACAATTCATTTCTCTGATGAAGGAGAACCGAGTTTATGAAATGTTAGATACCAGGGTGCTTAAGCAAGCGAGGAAAGAGGACATTCTTGCCATTGCAAATCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAATTAGAAGCACTGAGAAAGGTGCAAAGCTCTTTACAGATTAACCATGATCTTGAGCGTACAACTAGTGATATAATTCATGAATGCACAGAGGAAAGC 1958 0.4122 MELLHNLSILITMLLLCMLPHSLKCQQTYLNDTVYDCSGNPSAPKGYLCNGLHKSCTSFLLFRSIHPYDNPVSIAYLLGSEASNIASINNISRNEKVASNKSIIVPVFCSCNGNIYQHNTPYTAIKNDTYYELVKETFQGLTTCQAMMGQNYYAPINIAIGAELTVPMLCACPTENQTSRGVTSLLVYRVNYGDNIKSIGRAYGLDEQSVLEANELAVPISANRSMTPILVPLIGKNCKENPDKFYCKCYQGSDGSSKGLFCDESDGQKFPAKLVAGLGVGIGVGFLCLFLLGHKSYQHIRKKRTSIRKEKLFRQNGGYLLQEKLSLYGNGEMAKLFKAEELQRATDNYNKSRFLGQGGYGTVYKGMLPDGTIVAVKKSKQIERNQIETFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLSHHIHKRDNDSSLPWDSRLRIACEVAGAVAYMHFAASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSVPLDKTHLTTAIGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELITGKKPVSFLEEDDGQNLIAQFISLMKENRVYEMLDTRVLKQARKEDILAIANLAMRCLRLNGKKRPTMKEVSAELEALRKVQSSLQINHDLERTTSDIIHECTEES 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01260 650 Coils Coil 612 632 - -
Pste5g01260 650 CDD STKc_IRAK 355 622 - -
Pste5g01260 650 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Pste5g01260 650 SMART serkin_6 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01260 650 Gene3D Transferase(Phosphotransferase) domain 1 425 645 - -
Pste5g01260 650 FunFam Wall-associated receptor kinase 2 425 642 - -
Pste5g01260 650 Pfam LysM domain 188 218 IPR018392 -
Pste5g01260 650 SUPERFAMILY Protein kinase-like (PK-like) 333 619 IPR011009 -
Pste5g01260 650 Gene3D Phosphorylase Kinase; domain 1 320 424 - -
Pste5g01260 650 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01260 650 FunFam Wall-associated receptor kinase 2 320 424 - -
Pste5g01260 650 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 112 626 IPR045274 GO:0007166
Pste5g01260 650 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01260 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01260 Pste-Chr5 8118399 8120813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01260 279 623 Receptor kinase-like Gene Family AT1G16130 58.501 3.78e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste5g01260 Pkinase 8.4e-50 CL0016