Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01256 ATGTTTCTTCAATCAGTTAACTGCCAACAAGTATACCTCAACAACACTGTCTATGACTGCAAAGAAAACCCTTCTGCACCAAAAGGGTACCTTTGCAATGTTCTTCAAAAGTCATGCACTTCCTTCTTAGTTTTCAGGTCCAAATCTCCCTATGACAACCCTGTAAGCATTGCCTACCTTCTTGGCTCTGAAGCATCCACCATAGCCTCAACCAACAATATCTCAAGAGATGACAAGATTCCTTCCAATAAGTCAATCATTGTTCCCGTGTTTTGTTCATGTTCTGGAAATATCTACCAACATAACACTCCTTACACTGCCACCAAGAATGACACCTACTTCAAGTTGGTCACAGAAACTTACCAAGGCCTCACCACCTGCCAGGCTCTGATGGGTCAGAATTACTATGCCTCTGATAACATTAGAATTGGTGCTGAGCTCACAGTTCCAGTAGTATGCACTTGTCCCACTGAAAATCAGACAGAAAGAGGGGTCACTTCCTTGCTGATTTATTCAATGAACAAAGGTGACACTATCAAGTCCATAGGAGAGGCTTATGGTGTTGATGAACAAAGTATGCTAGAGGCAAATGGGGTGACAGTGCCACCAAGTGCGGAAAACAGCATAACCATCTATGCCACAACTCCAATCATAGTTCCTCTAAAAGGCAATAGTTGCAAAGAGGACCCGGATAGTTTCTATTGTACTTGTTCCCACGGAATGCTTACGAATGGAGACTTCATGGGGCTCCAATGTGATGGTTCTGATGATCAAGATTTTCCCACCAAATTGGTAGCTTCATTAGGTGTCGGAATTGGTGCAGGCTTTCTGTGCTTGTTTCTTTTCGGGTACAAATCATATCATTGCATACAGAAAAAGAGAGAAAGTATCCGTAAAGAAAAGTTATTTAGGAAAAATGGCGGCTACTTGTTACAAGAGAAGCTCTCTTTTTATGGCAATGGAGAAATGGCAAAGCTTTTCACAGCTGAAGAGCTGCAAAGAGCAACAGATAACTACAGCAGAAGTAGGTTTCTTGGTCAGGGTGGCTTTGGCGCTGTGTATAAAGGAATATTACCAGATGGAACCATAGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATAGAGACTTTTGTTAATGAAGTTGGCATTCTATCCCAGGTCAACCACAGGAACATTGTAAAACTCTTTGGTTGTTGTCTTGAGACAGAAGCTCCATTACTAGTCTATGAATTCATTCCCAATGGAACACTTTCTCACAATATCCATAGGAGAGACAATGAGCCCTCCCTTCCTTGGGACATTCGCCTAAGAATTGCATGTGAGGTTGCTGGAGCCGGAGCATATATGCATTTTTCAGCATCTATTCCCATTTTCCACAGAGACATCAAACCCACCAACATACTTTTAGACAGTAACTTCAGTGCTAAAGTATCTGATTTTGGAACATCAAGGTCAGTCCCACAAGATAAGACTCACTTGACCACAGCTGTAGGTGGAACCTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTCAATTTTCAGATAAGAGTGATGTTTATAGTTTTGGGGTTGTGCTTATAGAGCTCATAACTGGGATAAAGCCTATTTCATTCTTAGAGGAAGATGAGGGTCAGAATCTTCTTGCACAATTCATTTCTTTGATGAAGGAGAACCGAGTTTATGAAATATTAGATGCCAGGGTGCTCAAGGAAGCAAGGAAAGAGGACATTATTGTCATTGTAAATCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAGCGGAATTAGAAGAATTGAGAAAGGTGCAAAGTTCTTTACAGATCAACCATGGTCATGAGCGCAGAAATATTGACATAGTTCAAGAATGCACAGAAGAAAGCATCTTGGAATCAATAAATCTGTCTCAGAAAACGAAGTTCTCATTTCACAATACACGCAAAATTAAGGGTAGCTATACTCAAATGGCAGAGTCCTTCGCTCGAGAGAAATTGCTTCCACCAATAAGAGATGAAGCAAATATGCTTTTTGACATCCCGAAAGAATTTGCAGATATAAAAAGAGAACTAGAATACTTTCAATCCTTCCTCAAGGATGCTGATAGAAGGGCCGCAGAAGGAGACAATGGAAATGAGGGAATCAAAACATGA 2187 0.407 MFLQSVNCQQVYLNNTVYDCKENPSAPKGYLCNVLQKSCTSFLVFRSKSPYDNPVSIAYLLGSEASTIASTNNISRDDKIPSNKSIIVPVFCSCSGNIYQHNTPYTATKNDTYFKLVTETYQGLTTCQALMGQNYYASDNIRIGAELTVPVVCTCPTENQTERGVTSLLIYSMNKGDTIKSIGEAYGVDEQSMLEANGVTVPPSAENSITIYATTPIIVPLKGNSCKEDPDSFYCTCSHGMLTNGDFMGLQCDGSDDQDFPTKLVASLGVGIGAGFLCLFLFGYKSYHCIQKKRESIRKEKLFRKNGGYLLQEKLSFYGNGEMAKLFTAEELQRATDNYSRSRFLGQGGFGAVYKGILPDGTIVAVKKSKEIERNQIETFVNEVGILSQVNHRNIVKLFGCCLETEAPLLVYEFIPNGTLSHNIHRRDNEPSLPWDIRLRIACEVAGAGAYMHFSASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLIELITGIKPISFLEEDEGQNLLAQFISLMKENRVYEILDARVLKEARKEDIIVIVNLAMRCLRLNGKKRPTMKEVSAELEELRKVQSSLQINHGHERRNIDIVQECTEESILESINLSQKTKFSFHNTRKIKGSYTQMAESFAREKLLPPIRDEANMLFDIPKEFADIKRELEYFQSFLKDADRRAAEGDNGNEGIKT 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01256 728 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 86 620 IPR045274 GO:0007166
Pste5g01256 728 SMART LysM_2 104 150 IPR018392 -
Pste5g01256 728 SMART LysM_2 170 220 IPR018392 -
Pste5g01256 728 SMART LysM_2 50 89 IPR018392 -
Pste5g01256 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pste5g01256 728 ProSiteProfiles Protein kinase domain profile. 339 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01256 728 SMART serkin_6 339 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01256 728 FunFam Wall-associated receptor kinase 2 415 632 - -
Pste5g01256 728 FunFam Wall-associated receptor kinase 2 310 414 - -
Pste5g01256 728 SUPERFAMILY Protein kinase-like (PK-like) 323 609 IPR011009 -
Pste5g01256 728 CDD STKc_IRAK 345 612 - -
Pste5g01256 728 Gene3D Transferase(Phosphotransferase) domain 1 415 638 - -
Pste5g01256 728 Gene3D - 669 728 - -
Pste5g01256 728 Gene3D Phosphorylase Kinase; domain 1 310 414 - -
Pste5g01256 728 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Pste5g01256 728 Pfam Protein kinase domain 339 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01256 728 Pfam LysM domain 175 201 IPR018392 -
Pste5g01256 728 Coils Coil 602 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01256 Pste-Chr5 8103602 8106657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01256 269 613 Receptor kinase-like Gene Family AT1G16130 57.061 8.23e-135 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste5g01256 Pkinase 1.4e-46 CL0016