Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01242 CAAGGTACCAGGAGAAAATTAAAAATTAAAAAATAAAGAGCCTTACAAAAAAGCAAAAAGAGGAGGAGGATTGATTTCTTTCTTCTTTCCTTTTCTTTTTTCCTTGCAAACTCTGCTAAGCATCTTTGCCTACTCACTTTTCTGTTCTTTTATCTCCCTTCCCACTCCTTCATTCCTCTTGGAATTTTCTCTTTTTTCTAACCATATTATCTTGGTTTGAGGTTCCATTTCTAACATGCAATCTTGTTTCTTCTCCCACAAATTGCTTCTTCTTTAGGTGAATGTTGCAGGTTTACATTTTCTTACTCACTAGAGCCTTCTTCCTTTTCTGATTGTTCTCAATATTTTACACTTCCAATTTCAAAACTTACTCTCTCAATTACAAAACGGCATGCCCTGATCTCTTTTCAGGGTTCCATTGCTTGCTCAACAAAGAAACAGCAACAACACAGCAGCCAAAAAAGAAAATTCTAGTTTTGGAATTTGCCCTGATCTAAAAAATCTGAACTTTTTGGTATTTTGTTAAGTTCTTATTATTCTGTTTCTGGGTTTTATTGTTCATGGGACTGTGTCATGGAAAACCCATTGAAACCTCACAAAGTGAAGGTGGGCATCATGTTTTCCCTAATGAGAAAGAGGTGGAGGCTAGTTCCATAACCGCCACAAAAGGTTCAAAGTTTCCGTTTTACAGCCCAAGCCCGTTGCCAAGCCTGTTCAAGAATTCGCCCGCTAACTCTAGCGTGAGTTCGACACCTCTGCGGCTCTTTAAGCGGCCCTTTCCGCCTCCGTCGCCGGCGAAGCACATTCGGGCCTTGCTGGCCCGGCGCCACGGGTCCGTGAAGCCCAATGAGGCCTCCATCCCCGAAGGGAGTGAGTGTGAGCTTGGGCTCGACAAGAGCTTCGGCTTCTCCAACCACTTCCATGCTCACTATGAGCTTGGGCCCGAGGTGGGCCGTGGGCACTTCGGCTACACTTGCTCTGCCAAGGGAAGGAAAGGCACCTTCAAGGGCCATGATGTTGCTGTCAAAGTCATTCCAAAGTCCAAGATGACAACAGCAATTGCTGTAGAGGATGTAAGGAGAGAAGTAAAGATATTGCGAGCTTTGACTGGGCATAAGAATTTGGTGCAATTCTATGAAGCCTATGAAGACAATGACAATGTGTACATAGTTATGGAGTTATGCAAAGGAGGTGAACTTCTAGATAAAATTCTTTCTAGGGGTGGAAAGTACTCTGAAGAAAATGCCAGAGTTGTTATGATTCAAATATTAAGTGTGGTAGCTTTCTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTCTATATCTCTAAGGATGAAAATTCCACTTTGAAGGTCATTGATTTTGGACTGTCTGACTATGTAAAGCCAGATGAAAGATTGAATGATATTGTTGGGAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGTATTGGAGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTTTGGGCCAGGACAGAATCTGGCATATTTCGGGCTGTCCTGAAGGCTGATCCAAGTTTTGACGAAGCTCCATGGCCATCTTTATCCGCTGATGCAATAGATTTTGTAAAGAGACTGTTGAATAAGGATTATCGTAAAAGACTAACTGCAGCTCAGGCTCTCAGTATGTTCTCCATTTCCCATAGGTTGTGCATGGCACTAAATTTGGCAATTTACAATCCCATGAATTCTCTTGCTCATAGCTTAATTTTATGCACAGGTCATCCATGGCTCGTGAATCATTGTGATGATGTAAAGATACCTTTTGATATGATAATCCACAAACTTGTTAAAGCTTATATATGCTCATCTTCGTTACGCAAATCGGCATTGGGGGCTCTTGCAAAGGCATTAACCTTAGTGGAGCTAGCATATCTGAGAGAACAGTTCAATATGCTGGGGCCAAACAAAAGTGGGTTAATCTCCATGCAGAACTTCAAGACAGCTATTTTAAGAAGTGCCACCGATGCCTCAAAGGATTCAAGGGTCTTAGATTATGTGAACATGGTTAGTTCAATCCAATATCGGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTCCATCAACTAGAGGGAATGGAGAGCTGGGAGCAACATGCAAGGCGTGCCTATGAATTGTTTGAAAAGGAAGGAAATAGACCAATTATGATTGAAGAGCTTGCCTCGGAACTTGGACTCAGTCCATCAGTGCCTATTCATGTGGTACTCCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGCTTCTTGGGGTTTGTTAGACTTCTGCATGGAGTTTCTTCTCGTACTTTTCAGAAGGCTTGAAAGAAAATACTCGTGATTGTTATTACTTTTTGTCCCCCTTATTTGATCATAACCCTTTTGAATGCATGGTTCATGAGCAAACTCCAACAGCAGGTTTCTTCATCTTGATTGCAAACATGGCTTCAGCAAAGCCAGAAGCTATGGCTTGAAGGGAATTTGTTACCTCTGAAGTGATGAGCAACATCTCCTGTTGTTAAGCTCCCTCTTCATGATTTCTACAAACACAAAACACTTTGCTCCATCTTGTTTCTACTTCTTCAGATTGATTGGTGGTGCTGGAGTTAAGGCTTGTACAGATGAACTTAGGACAAGTGGAACTTCCATAAAGTGAGTTGTGTTTTTGGGTTTATCCCTTGTGTACTCATGACATTTGTCAATAAACTATTTCCACTTATGTGAACTCCTTTATAGTTGAGATAACTTTCTTTTTTCCTCAGAAGAAAACTAAATTGTTAATACTCATGGG 2859 0.4127 MGLCHGKPIETSQSEGGHHVFPNEKEVEASSITATKGSKFPFYSPSPLPSLFKNSPANSSVSSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECELGLDKSFGFSNHFHAHYELGPEVGRGHFGYTCSAKGRKGTFKGHDVAVKVIPKSKMTTAIAVEDVRREVKILRALTGHKNLVQFYEAYEDNDNVYIVMELCKGGELLDKILSRGGKYSEENARVVMIQILSVVAFCHLQGVVHRDLKPENFLYISKDENSTLKVIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALSMFSISHRLCMALNLAIYNPMNSLAHSLILCTGHPWLVNHCDDVKIPFDMIIHKLVKAYICSSSLRKSALGALAKALTLVELAYLREQFNMLGPNKSGLISMQNFKTAILRSATDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKEGNRPIMIEELASELGLSPSVPIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01242 610 SMART serkin_6 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01242 610 SUPERFAMILY Protein kinase-like (PK-like) 122 408 IPR011009 -
Pste5g01242 610 Gene3D - 439 528 - -
Pste5g01242 610 ProSiteProfiles Protein kinase domain profile. 124 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01242 610 FunFam Calcium-dependent protein kinase SK5 296 390 - -
Pste5g01242 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Pste5g01242 610 Gene3D Phosphorylase Kinase; domain 1 117 213 - -
Pste5g01242 610 Gene3D - 444 598 - -
Pste5g01242 610 FunFam CDPK-related kinase 1 456 528 - -
Pste5g01242 610 FunFam CDPK-related kinase 1 117 212 - -
Pste5g01242 610 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Pste5g01242 610 Gene3D Transferase(Phosphotransferase) domain 1 214 395 - -
Pste5g01242 610 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Pste5g01242 610 SUPERFAMILY EF-hand 449 601 IPR011992 -
Pste5g01242 610 FunFam CDPK-related kinase 3 116 288 - -
Pste5g01242 610 PANTHER SERINE/THREONINE-PROTEIN KINASE 110 586 - -
Pste5g01242 610 CDD STKc_CAMK 123 382 - -
Pste5g01242 610 Pfam Protein kinase domain 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01242 610 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01242 Pste-Chr5 8027378 8033718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01242 1 608 EF-hand Containing Proteins AT3G50530 62.896 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste5g01242 Pkinase 1.4e-66 CL0016