Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01240 ATTCGATTCCCTAATTTCGGGTTTCTCTTTGGTTTCTGAACATCACAACAACACTCACTACCACACGCACACTCCAGTCTCCAAACTGAATCAAATTTAAGTTGAATTTGAATTTAAATTTGAATTTGACTTTTCAACTTCCTTGTGATGCCTTACTTGGTCCGAGAGAGCCTCTCGATCGGCAACATCGGCGACGCGGCGGAGATTCTCCAAAACGACACCGTTCACAGCGTGACGCACGTCCTCTCCGTCCTCAGCTCCGCCTCTATCTCCTTCTTCTCCGAATGGCGGTCTGGGTTCTCCATCCCCGCCAAGGAGATCACCAAAGTCCACGTGGCGGATGCCGCCGCCACATCGGCGCTCCCGCTGGACAAGCTTCTCTACTTGCTCGAGTACGCCGGTCGCGACCTCAAGCTCGTGCGGATGGCCGTGCCTCTCAGAGACACCGAGCAGGAGGACATATTGGATTACTTGGAAGTTTGCATCGATTTCATTGATCGCGGTCGCAAGGAAGGTTCCGTTCTCGTTCACTGTTTCGCCGGAGTTTCCAGAAGTGCGGCGGTTGTTATGGCGTATTTGATGAGAACAGAACGTCTATCGACTGAAGATGCCCTTGAATCGTTGAGGCAGAGCTGTGAATTTGTTTGTCCCAATGATGGTTTTCTAGAGCAGTTGAAAATGTTTGAGGGGATGGGTTTCAAGGTTGATCACTCCAGCCCTATATACAAGCGTTTTCGTCTAAAAATACTAGGTGAGAATTATTTGCATGAGTTGAGGATAGACAGTGCTAAACTTGGTGCAGATCCCGGCATGCCTGTTGAAATTTCTTCTGAGGCGGAAGAAACAACTAAAGCTGAAAATAACCGTAGTCCTACATATCGCTGTAAGAAGTGCCGGCGACTTGTTGCATTGCAAGAACATGTGATAGACCATGTTCCTGGTGAGGGTGAGACAAACTTTGAGTGGCACAAAAGGAGAGGTGGCAACCCTTGGAACAAATCTAATGAATCTGAGTGTTCATCCATATTTATTGAGCCCCTACGGTGGATGAAAGCTGTTGAGGAAGGCGCAATGGAGGGAAAGCTGTCCTGTGCTCATTGTGATGCTCGTTTGGGATACTTCGCTTGGTCAGGCATACAATGCAGCTGCGGAAGCTGGATAACCCCAGCTTTTCAAATCCACAAAAGCCGGATAGACATAAGCCCTATGTAACCCTTGTTGGGTGATTTTATGCATATCCCCTTTTCGCAATAAGGGGTGTCACTTATAATTTGTTCTTTGACTTGTGCTCTGCTCAAGTTTTCCAAGCTGGTGCACTGCCAATGAAGTTATGAAAAGAAGGACAGAAGTATTGTTCAAGTTTTCCAGGCTAAACCAATGCAGTTATGGAAGGCAGGATTATAGTTTTACACTTTTTGGAGCTATGGCTGGAGGTCATGGGTTACGCTTTTCTAGTAAATGGCGAGGCATGAGTTGGGTTTCCAATACTTGGGCTTGTTCCCTTGATGATTTTACCGTAAGCAAGCACAAGTTTTTCTCTACAAAGGAAAAACGAGTGTTCACCATTGTACCTTGTTTTCTTTTTATTCTCAATATGCTATATATATTTTTTTTCTTCGGTGTGAAGAAATTGGCTACAAGTTGAAAAACAGACACAAGGGTATGAATCTAACGGATTAATACATCCGCGTGAATGAATGCA 1702 0.4565 MPYLVRESLSIGNIGDAAEILQNDTVHSVTHVLSVLSSASISFFSEWRSGFSIPAKEITKVHVADAAATSALPLDKLLYLLEYAGRDLKLVRMAVPLRDTEQEDILDYLEVCIDFIDRGRKEGSVLVHCFAGVSRSAAVVMAYLMRTERLSTEDALESLRQSCEFVCPNDGFLEQLKMFEGMGFKVDHSSPIYKRFRLKILGENYLHELRIDSAKLGADPGMPVEISSEAEETTKAENNRSPTYRCKKCRRLVALQEHVIDHVPGEGETNFEWHKRRGGNPWNKSNESECSSIFIEPLRWMKAVEEGAMEGKLSCAHCDARLGYFAWSGIQCSCGSWITPAFQIHKSRIDISPM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01240 354 CDD DSP_DUSP12 4 187 - -
Pste5g01240 354 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 161 IPR000387 GO:0016311|GO:0016791
Pste5g01240 354 ProSitePatterns Tyrosine specific protein phosphatases active site. 127 137 IPR016130 GO:0016311|GO:0016791
Pste5g01240 354 Gene3D Protein tyrosine phosphatase superfamily 5 202 IPR029021 -
Pste5g01240 354 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 350 - -
Pste5g01240 354 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 185 IPR020422 GO:0006470|GO:0008138
Pste5g01240 354 FunFam Dual specificity protein phosphatase 12-like 4 202 - -
Pste5g01240 354 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 186 IPR029021 -
Pste5g01240 354 Pfam Dual specificity phosphatase, catalytic domain 91 180 IPR000340 GO:0008138|GO:0016311
Pste5g01240 354 SMART dsp_5 1 182 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01240 Pste-Chr5 8010573 8015074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01240 90 180 Protein tyrosine phosphatase (PTP) family AT3G06110 38.043 3.00e-15 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01240 5 8010573 8015074 Pste5g01240 5 8010573 8015074 ECH