LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g01221	GTCGGGTTGACAATACAAATCAGGTGTGTGTCGGGTGTATGTATTTTTGCTTGGGTCCACCACCAACCAGCGCGGACACAATAACGGTCTCGCTTCGCGTGTGCACCAGTAGGCCGCGAAACACCCAATCAGATCCATCCAGCGTCGGTGGTTTAACTCCCTCTGCATCTCCACCACCGGCGCAGCCGCAAGCACTTTCCGATTCAGATTCAGCATGTTCAAATTCCTGAAAGAGGTCGTTGGTGGATCTGGCACCGGCGGCCTCAAGGATCTCCCTTACACCATCGCCGAACCTTACTCCTCCGCGTGGGGCTCTTGGACTCATTCTCGCGGCACCTCCAAGGACGACGGTTCTCCCGTCTCCGTCTTCTCTCTCTCCGGCTCCAATGCTCAGGACGGTCACCTAGCTGCTGCGCGCAACGGCGTCAAGCGTCTTCGAACTGTCAGGCATCCCAATATCTTGTCCTTTCTTCACAGCACTGAGATTGAAACTTATGATGCAGGTTCTCCCAAGGTTACAATATATATTGTCACTGAGCCTGTCATCCCACTATCTGAGAAGATCAAGGAGTTAGGCCTTGAAGGTACACAAAGGGATGAATATTATGCTTTGGGTCTTCATCAAATAGCTAAAGCCGTGAGCTTCTTGAATAATGATTGTAAACTTGTTCATGGTAATGTTTGCTTGGCTAGTGTTGTTGTGACACCAACTTTGGACTGGAAGCTTCATGCTTTTGACGTTCTATCCGAGTTTGATGGGAGTAACGAAATGTCTTCTGGCCAAATGCTGCAATATGCATGGCTTGTTGGATCACAATACAAACCAATGGAGTTGGTAAAATCAGACTGGGATGCAATTAAGAAGTCTCCGCCATGGGCCATTGATTCTTGGGGCATGGGTTGCCTAATCTATGAGGTATTCTCTGGTCTGAGGTTGGGCAAAACAGAGGAGTTACGCAACACTGGTTCCATTCCCAAGTCTCTGCTTCCAGATTACCAACGACTATTGAGTTCCATGCCCTCTCGTAGATTAAATACATCAAAGCTTATTGAAAACAGTGAATATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAGATTCTCAGCTTGAAAGATAGTGTGGAGAGAGACACCTTCTTCCGCAAGCTTCCAAATTTAGCTGAGCAACTTCCTCGCCAGATAGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCTCAGCATTGACCGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTTAATGTAAAGGTACTTCCAACAATTGTAAAACTCTTTGCTTCCAACGATCGAGCTATTCGAGTTGCTCTTCTTCAACATATTGATCAGTATGGAGAGTCTTTATCAGCACAAGTTGTTGATGAGCAAGTTTACCCTCATGTTGCTACTGGGTTCTCCGATACATCTGCTTTTCTCAGGGAACTGACTCTCAAGTCTATGTTAATTCTGGCCCCAAAGTTGTCTCAAAGGACCATGTCAGGGTCATTATTGAAGTATCTGTCAAAGTTGCAGGTTGATGAAGAACCAGCAATTAGGACAAATACTACCATATTATTAGGCAATATTGGAAGTTACCTAAACGAAGGAACAAGAAAAAGAGTTTTGATTAATGCATTTACAGTCCGTGCATTACGTGATACTTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCTACTATGACATCACTGAAGTTGCAACCCGGATTCTTCCTAATGTTGTTGTGCTCACAATTGATCCTGACAGTGATGTTAGAACTAAGGCATTTCAAGCTGTTGATCAGTTTTTGCAGATAGCAAAGCAACATTATGAAAAGACAAATGCAGCAGATTACAGTAGTGGTGCAAGTGTGGGAAGCTCATCCGTTCCAGGAAATGCTAGTTTGCTTGGATGGGCTATGAGCTCTTTGACCTTGAAGGGTAAGCCTTCTGATCAGGCTCCAGTTGCTTCTGCAAGTTCGACTGCAATCACCTCAACTTCTTCTAATGGCACCACAGGTATAGAGACACCATCAACAGCACCAGCCCGTGTAAGCTCTACAACAGATTTGGCTGAACACCCTATTCCTACATCTCCTACATCAACCGATGGCTGGGGAGAACTTGAGAATGGAATTGATGAGGAGCATGGAATTGATAGGGATGGGTGGGATGATCTAGAACCACTTGAAGAGACAAAGCCAGCTCCAGCTCTTGCAAACATTCAAGCTGCCCAAAGACGGCCTGTTACTCAACCTATTTCACATACAAAACAAGCCTCAAATTTGCTATCCAAAAGTACACCAAAATTGAACAAGGATGAGGATGATGATTTGTGGGGATCTATAGCAGCTCCTGCTCCTAAAACTTCAAGACCTTTAAATCTAAAAACTGTTCAAAGTGATGATGATGATCCTTGGGCTGCCATTGCTGCTCCAGCACCCACTACCAAGGCCAAGCCCTTATCTGCTAGCAGAGGTAGGGGAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGCGGATAAACCGGGCATCATCAGGCATGTAATCCAAACTGCCAGGTAACAAAAAGAAATGTGGAAAGAGTTAATCTTAGTCCTAGACCTTTTCTTATGGTGGCAGTGATCATGTTAAAATACAAGAACCCTTTTCTATAATATATGAATTACATGTGATTTTATTGACAAAATTGATTTGTAATACTATTCTTTTGTATGTCAAGAATTTTACTTGAAGGGAAATCTTTGGGGTAGCGTTTTCTGAATCGTTGTAAGGAGACAAGGTTGTGATATATTTGCTATATATTTGGGGTTTTTAAATATTTTTATTTGACGAACAACTACCAATTAGATGTGATGTAATTAGTTTGATAAT	2931	0.4364	MFKFLKEVVGGSGTGGLKDLPYTIAEPYSSAWGSWTHSRGTSKDDGSPVSVFSLSGSNAQDGHLAAARNGVKRLRTVRHPNILSFLHSTEIETYDAGSPKVTIYIVTEPVIPLSEKIKELGLEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFDGSNEMSSGQMLQYAWLVGSQYKPMELVKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRLGKTEELRNTGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALTALLKMGSWLSAEEFNVKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTMSGSLLKYLSKLQVDEEPAIRTNTTILLGNIGSYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRTKAFQAVDQFLQIAKQHYEKTNAADYSSGASVGSSSVPGNASLLGWAMSSLTLKGKPSDQAPVASASSTAITSTSSNGTTGIETPSTAPARVSSTTDLAEHPIPTSPTSTDGWGELENGIDEEHGIDRDGWDDLEPLEETKPAPALANIQAAQRRPVTQPISHTKQASNLLSKSTPKLNKDEDDDLWGSIAAPAPKTSRPLNLKTVQSDDDDPWAAIAAPAPTTKAKPLSASRGRGAKPAAPKLGAQRINRASSGM	796

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g01221	796	Gene3D	-	283	562	IPR011989	-
	Pste5g01221	796	MobiDBLite	consensus disorder prediction	692	715	-	-
	Pste5g01221	796	MobiDBLite	consensus disorder prediction	692	796	-	-
	Pste5g01221	796	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	7	775	-	-
	Pste5g01221	796	MobiDBLite	consensus disorder prediction	595	653	-	-
	Pste5g01221	796	Gene3D	Transferase(Phosphotransferase) domain 1	110	282	-	-
	Pste5g01221	796	SUPERFAMILY	ARM repeat	294	553	IPR016024	-
	Pste5g01221	796	SUPERFAMILY	Protein kinase-like (PK-like)	39	288	IPR011009	-
	Pste5g01221	796	ProSiteProfiles	Protein kinase domain profile.	4	285	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste5g01221	796	SMART	serkin_6	4	285	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste5g01221	796	Gene3D	Phosphorylase Kinase; domain 1	14	108	-	-
	Pste5g01221	796	MobiDBLite	consensus disorder prediction	595	676	-	-
	Pste5g01221	796	ProSiteProfiles	HEAT repeat profile.	367	405	IPR021133	-
	Pste5g01221	796	ProSiteProfiles	HEAT repeat profile.	524	562	IPR021133	-
	Pste5g01221	796	MobiDBLite	consensus disorder prediction	657	676	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g01221	Pste-Chr5	7935770	7952071	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g01221	71	292	MAP Kinase Kinase Kinase	AT5G66850	24.576	2.36e-06	49.3

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	SCY1_SCYL1	Pste5g01221		None	None	None