Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01219 GTGATATTCATGGCTAACATTCTTTCATAGCATTTGAATTGTCTTCTTAGCTTCTCAAATCCAAATCCCAATCCCAATCCCAATCCCAATCCAGGGTAAGCGCCCCCTAAAATATATTCCTATTCCTATTGATGCTTTGCTACAATTTGAGAGAAACAAAGAATAAGGTCTTCCCTAATACCAAGCAACAACCTTCTTCCACCAAATCAATTTCACCGGCCATTACCATTTGACCATCATCATCGTCACGCCTTTGAAACTCAAAATTCTAAAACCCCATATGAATCACATGCTTTCCACCTAAACCCACTTATATTCATTCCTCTCTTTTGTTTTTCTTTCTTCATTCTCCCCATTACCATGGTTTCCCTTTCAACCACCCCTTTTCTTCCCTTCACTGCACAAAACGCTTCCACTAGAATCCCTTCTCCCAATTCACTCTGTTACAACAACAACAACAACCAACTTAATAGGGATCGCAGTAAGGTTCTCTGCGCCTGCATCGCGCCTCCGCAAAACTTCAAGAGCCAGGACTCTTCGGCTATTAATTTCAATGGTTCGTCCAAATCAGAACATTTGAGCACGGCGCGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGATATCAGGGATGGGGAAGCTGTTGGAATAATTGGCCCCTCTGGGACTGGTAAATCCACAGTTTTGAAGATTATTGCAGGACTTCTTGCTCCAGACAAGGGGGAAGTTTACATTCGAGGTAAAAAGCGAGTTGGTTTAGTAAGTGATGATGACATATCTGGTCTTCGGATTGGATTAGTTTTCCAAAGTGCTGCACTCTTTGATTCTTTGACTGTTCGTGAAAATGTCGGTTTTCTCTTATATGAACACTCAAGCATGTCTACAGACCAGATATCAGAGCTTGTCACAGAAACTTTGGCTGCAGTTGGATTGAAGGGAGTTGAGGATCGGTTGCCTTCTGAGCTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGTTCTATTATTTGTGACACCACAAAGGAATCAATAGAGCCAGAGGTGTGTACTCCTAGGCTAGAAGACATGGGAAATATGAGCAAAAGGCAGAAGAAGGATTTGGATTGTCACAACCTTGCTTGCATGGCAAGGAGGGTGCTCTTGTATGATGAACCAACTGCTGGACTTGATCCCATTGCATCTACTGTTGTTGAGGATCTGATTCGCTCTGTGCACATAAAAGGACGAGATGCCCGTGGAAAGCCTGGGAACATTGCATCTTATGTGGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACTACTTCAACGAACCCAATTGTTCAGCAGTTTGCATCTGGAAGCTTAGATGGTCCTATCAAATATTAGAACTGTACTGCAATTGTAAACTAGATAACAGGATTATGGCTGGTCTTGGCTACCATGAAGTGTGCAGTTAGGAATGCGCAACAAGGTTTTAACGGGTTTGTGAGGGTTTTGGTATTAAATTCCAATTTGACTTTTATAGAATTGGTCATCTGCATTGGATTAGAGGCCATGATAGCTTTTCTTTTCTTTTTTATTTTTTTGGGGTAGGGGTAGAGGACAACTTATTGTTACCGATGATTAAATTTATTGGCAAAAGGTGCATATTACATGCACACCATATATTAGAAGAGATTGGTGGAACCTGATGTAATAATATTAGTTCTATGTGGAGTACTTGATTTACTAGATTGTGTTTTTGTAAACAATTCATTGTAGCCAATAAATTTGCTTCATAATTTTGGATTTTCTTGTCTGATCTTATATCTAAA 1874 0.4023 MVSLSTTPFLPFTAQNASTRIPSPNSLCYNNNNNQLNRDRSKVLCACIAPPQNFKSQDSSAINFNGSSKSEHLSTARDHEDDSDVLIECRDIRDGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSTDQISELVTETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVCTPRLEDMGNMSKRQKKDLDCHNLACMARRVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDARGKPGNIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01219 361 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 352 IPR003439 GO:0005524
Pste5g01219 361 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Pste5g01219 361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 334 IPR027417 -
Pste5g01219 361 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 13 361 - -
Pste5g01219 361 Pfam ABC transporter 92 222 IPR003439 GO:0005524
Pste5g01219 361 Gene3D - 89 353 IPR027417 -
Pste5g01219 361 SMART AAA_5 94 329 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01219 Pste-Chr5 7928703 7933177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01219 89 330 Calmodulin-binding Proteins AT2G36910 23.387 2.22e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01219 5 7928703 7933177 Pste5g01219 5 7928703 7933177 ECH