Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01208 ATGCACAATTGTGAGACAATGGAAGACTTAAAGGAAAAGGTCAATGAAAGGGAACCAAAGCAAATCAAGTACAGAGGAGTACGGACGAGGCCATGGGGAAAGTTTGCTGCAGAGATTAGAGATTCAGCTAGACATGGTGCTCGTGTGTGGCTTGGGACCTTTAATACTGCTGAGGAGGCTGCAAGAGCTTATGATCGTGCTGCCTTTGAGATGAGAGGTACTATGGCCATTCTCAACTTCCCAGATGAGCACCCTCCTTGCAATGTGGCTTCTCGTAGCAAGTCCTCATCATCTAAAACCGAGCTTGGTAAACAAGTTCTAGTGTTTGAATGTTTGGATGACAAATTGTTAGAGGAACTCCTTGATTGTGATGAAAAAACCATCAACTGCAACTTGGATGTGTAG 405 0.4444 MHNCETMEDLKEKVNEREPKQIKYRGVRTRPWGKFAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFEMRGTMAILNFPDEHPPCNVASRSKSSSSKTELGKQVLVFECLDDKLLEELLDCDEKTINCNLDV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01208 134 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Pste5g01208 134 PANTHER DNA-BINDING DOMAIN 15 111 IPR044808 GO:0003700|GO:0009873
Pste5g01208 134 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Pste5g01208 134 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Pste5g01208 134 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Pste5g01208 134 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Pste5g01208 134 SUPERFAMILY DNA-binding domain 23 83 IPR016177 GO:0003677
Pste5g01208 134 Gene3D AP2/ERF domain 22 82 IPR036955 GO:0003700|GO:0006355
Pste5g01208 134 FunFam Ethylene-responsive transcription factor 2 23 83 - -
Pste5g01208 134 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01208 Pste-Chr5 7814156 7814560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01208 20 126 AP2-EREBP Transcription Factor Family AT3G23230 56.557 3.14e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste5g01208 AP2 1.3e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01208 5 7814156 7814560 Pste5g01208 5 7814156 7814560 ECH