Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01198 TCACCATATAATTGTGAGTTGGGTTTTCCAATTCGAATTGCAAGGATTGTAAAGGGTAAAACAGAAAGAAGCAGTAAATCGGTGGAAAGGCATGATGATAAAGGGCAGCAATGTATTTTGTCTTCCCAAAACAATCCTCAATTCTGTCTAAAACATGGTCAAATACTGAATAGGAGAGATTGGTATTGCAGTATTAGCGTTAAGTGTGGTGGTGGATTTGTTTGTGTTTTGACGGCAGCGAGGGAAAGTTGGAAGCTTGGTTGGTTTGGTGGGGTGAGTGATGGGTGCGGATCGTCTGCTACTGCCAACAGTTGGACCGCCATTAAAACGGCGAGCGGGGTTGCGGAGGAAGCAGGCTGGAAGAGGGTCGTACAGAGGGAGCTAGGAGAGGGTGGGGGGGACAACATGGGTACCAACTTGCACCAGGTACTCAGAAGCCTCTGTTTGAATACTCACTGGAACTATGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTAACATGGGAGGATGCATACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCAGAAGACCTTGGAACAGATTGGTTGTGGGAAATTTTCACACAGTGCATTAGGGTTAGCGGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTAGCTATTACTGGAAAGCATAGGTGGATCTGTGCAGATAATCAAGTTGCAGGTTCCGGCTTGTCTTTTGAGTTTGCTGATGGATGGCAATCGCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGTCCCACTTGGCGTTGTTCAGCTTGGCTCTCTAAATAAAGGTAGTTTCAAGAGTTCTTTATCTCAGCTGGATATATTGAAGGAAAAATTCTCTTCAGATATTATGCCTACTTGCTTTTACGATACACAGAAATCTATGAAGAGTGAGACAGCAGATGTTTTAGTGCCCCTTCAATGTTCTGGGAGGAACTATGCACCTCCTGCTTGTGAGAAAATGTCTGATAATGTGGCCAAGCAAGAGGGGCCTGAATTGTACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGGATGTGGAGCATCAGGAATTTGAAGAGATGAAACCTCTATATGGGAGGAAGTGTGAAGGAGGAAGTAGTGGCTACAAAAATATGGGGTCAGAACCAGAAAAGAATGGCTCATCATTTTTAAAGGACTTTGTTATAGATAGTGGTAGCTTCAATGATTTAATATGCCCATCAGAAGTGAGAATTGATTCTGCATGCTTTCCTTCAGCCTTTCTTGATACAGTTGTTTGTGAAAGTGATAAGTTGCATAATGTGGATATTAACCAAAAAAAGGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCTCTACAACATACTGAAAATTCAAAGTTTCACACTGAGCCTTTTTACAAGGATGCGTCACACATGCTGAAGTTCCCTGCTGACTGTGAGTTGCATGAAGCACTTGGACCAGCTTTTCTGAAAGGAAGTAAATATTTTGATTGGGCAGAACAGGTTAATCAAGATATGAAAACGGTTGAAATGTCAGATGAGATTAGCACTAGTCAATTGACTTCTGAATCTCGTCCAGAACATCTTTTGGAGGCAATGGTGGCCAACATTAGCCATAGTAATAATGATATTAATAGTGAATTATCATTTTGTACATCAATGCAGTCTGCATTGGCCTCTGGAAAAAATCATGAAGCTTCTATTCACAATTTGCAATCTATTAATTCTGAAGGCTATTCAATAGATCAGCTCTCTCTTGTCAGAGAGGATAAACACCATTCTTTGAGTTCATCATCTGGGATATGTGGTGTGATGTCCTCAAAAGCTGTTTCATCTACATTTCCTAGCTCTAATAGTGGACAGCTTGATAGGTCGTCTGAACCATCTAAAAACAGCAAAAAGAGGGCAAGGCCAGGGGAAAGTTGTAGGCCTCGGCCAAGGGACAGGCAACTGATCCAAGATCGTATTAAAGAGTTGAGAGAGCTGGTGCCCAACGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGAGCTATAAAGCACATGCTCTTTCTTCAAAGCATAGCTAAACATGCTGACAAGTTGACTGACTTTGCTGATACAAAATCGAAGTTACATCACATGGGAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAAGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGGCAGATGCTTGTTGAGATGCTCTGTGAGGAGTGTAGCCATTTTCTTGAAATAGCTGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAGGGTGCAACTAAAGCCCATGATGAAAAAATATGGATATGCTTTGTTGTCGAGGGTCAAAATAACAGAAACGTACACAGATTAGACATTTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGCATTCACAATAACTGGTTGGTGCTTGGAAACTTAGTGGCCACTCATTGGCAAGTGTGACTCGTTGATATCTGAAATTAAATGCTCACCTTTACAGTTTATAGTCTGTTAAGACATAGATTGTGGTTGTGTTTGTGTATTTTTAATGATTGAAATGTGATTGTCATTGTTTATGTTTGACACTGGAAATAGCACAATACGTTGAACACATATTAGCGTCACTCCTTTCATGTATCGAACTTCTCGTATATTTACTAAATTTAACTTTCTA 2798 0.4107 SPYNCELGFPIRIARIVKGKTERSSKSVERHDDKGQQCILSSQNNPQFCLKHGQILNRRDWYCSISVKCGGGFVCVLTAARESWKLGWFGGVSDGCGSSATANSWTAIKTASGVAEEAGWKRVVQRELGEGGGDNMGTNLHQVLRSLCLNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCQKTLEQIGCGKFSHSALGLAVAKMSYHAYSLGEGIVGQVAITGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVVPLGVVQLGSLNKGSFKSSLSQLDILKEKFSSDIMPTCFYDTQKSMKSETADVLVPLQCSGRNYAPPACEKMSDNVAKQEGPELYSDESSILLQSISNMMDVEHQEFEEMKPLYGRKCEGGSSGYKNMGSEPEKNGSSFLKDFVIDSGSFNDLICPSEVRIDSACFPSAFLDTVVCESDKLHNVDINQKKVLNFTQPSDANSLQHTENSKFHTEPFYKDASHMLKFPADCELHEALGPAFLKGSKYFDWAEQVNQDMKTVEMSDEISTSQLTSESRPEHLLEAMVANISHSNNDINSELSFCTSMQSALASGKNHEASIHNLQSINSEGYSIDQLSLVREDKHHSLSSSSGICGVMSSKAVSSTFPSSNSGQLDRSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSIAKHADKLTDFADTKSKLHHMGADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATKAHDEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVHSQ 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01198 846 MobiDBLite consensus disorder prediction 651 674 - -
Pste5g01198 846 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 140 286 IPR025610 -
Pste5g01198 846 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 660 709 IPR011598 GO:0046983
Pste5g01198 846 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 673 715 IPR036638 GO:0046983
Pste5g01198 846 MobiDBLite consensus disorder prediction 636 650 - -
Pste5g01198 846 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 334 845 IPR043561 GO:0003700|GO:0006355
Pste5g01198 846 MobiDBLite consensus disorder prediction 636 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01198 Pste-Chr5 7724019 7733474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01198 136 841 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 37.922 1.45e-135 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01198 5 7724019 7733474 Pste5g01198 5 7724019 7733474 ECH