Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01197 TGAAATCGAAGACAAGAAGAGATTCTGGAATGAAAAAAATGAAGCCTTTCTTGGCCTTTCCCTCTTTCCTCACTACATAACACAAATCAATACTAATCCATTATTTTGGAGAGAGGATTCCAATGGCAATGATGATAGTGGAGGTTGAAAGTGCCCACGAAAACGACCCCGTTCTCCTTCCGCCCCCTAACTTCGCCATGGTTGAGGACTGCATTTTCCGATCCGGTTTCCCCACCCCTTCCAATTTCCCCTTTCTCCAAACCCTAAACCTTCGTTCCATCATATACCTCTGCCCTGAGCCTTATCCTCATGAAAATCTTGATTTCCTTCGCTCTCAGAATATTCGGCTCTTTCAATTTGGAATCGAGGGGAAAACGGATGTTTCTATGCCTATTCTTAAGGATTCTATCATGGATGCCCTGAAAGTTTTAATTGATGTGAGAAATCACCCTGTTTTGATCCATTGCAAGCGAGGAAAGCATAGAACAGGTTGCCTTGTTGGTTGCTTGAGAAAATTACAGAATTGGTGTTTGTCTTCTGTGTTTGAGGAGTACCAGCTATTTGCCGGAGTTAAATCCAGGACAACAGATTTATCATTCATAGAAAAGTTTGATATTTTAAGCCTGAGTCAGTGCCTTTACAGCATCATCTACCAGTACCATGGATATGGTTCAAAGAAGCGCAGGCTGTTGTATAAGGATGAGAATTTACAGAAGCCCCGACTGACATCATTTTAGCTCAGCCGGGATTTTGATTCTTTGCTCCCCTTTATTTTGTAGAACTCATACTTCATATAGTTGCTCTGATTCTTTCATCGTTATCTTCAAATATCTTTCAAGAGTACTGCTAATGAAACATATGGTCTTGTTTTGTCAACCTTCCCTGTTACCTTTATAGTTTTTCATTATCTCTCACCTACAGAAATACAGTGGTGCAAAACACGTATCTTAAGTGGGTATTAATTGTGAGTGTGATAGGCTTCTGAGGCCAT 991 0.4067 MAMMIVEVESAHENDPVLLPPPNFAMVEDCIFRSGFPTPSNFPFLQTLNLRSIIYLCPEPYPHENLDFLRSQNIRLFQFGIEGKTDVSMPILKDSIMDALKVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQLFAGVKSRTTDLSFIEKFDILSLSQCLYSIIYQYHGYGSKKRRLLYKDENLQKPRLTSF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01197 204 ProSiteProfiles Dual specificity protein phosphatase domain profile. 23 178 IPR020422 GO:0006470|GO:0008138
Pste5g01197 204 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 164 IPR029021 -
Pste5g01197 204 PRINTS Plant and fungal dual specificity phosphatase signature 55 68 IPR020428 GO:0016791
Pste5g01197 204 PRINTS Plant and fungal dual specificity phosphatase signature 91 105 IPR020428 GO:0016791
Pste5g01197 204 PRINTS Plant and fungal dual specificity phosphatase signature 18 35 IPR020428 GO:0016791
Pste5g01197 204 PRINTS Plant and fungal dual specificity phosphatase signature 74 88 IPR020428 GO:0016791
Pste5g01197 204 Pfam Tyrosine phosphatase family 18 166 IPR004861 -
Pste5g01197 204 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 174 - -
Pste5g01197 204 Gene3D Protein tyrosine phosphatase superfamily 17 167 IPR029021 -
Pste5g01197 204 FunFam probable tyrosine-protein phosphatase At1g05000 17 167 - -
Pste5g01197 204 ProSitePatterns Tyrosine specific protein phosphatases active site. 113 123 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01197 Pste-Chr5 7720940 7723268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01197 4 200 Protein tyrosine phosphatase (PTP) family AT3G02800 69.543 4.98e-104 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01197 5 7720940 7723268 Pste5g01197 5 7720940 7723268 ECH