Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01192 GTGTTATGTGGAGAAGCAAAGATTTCATTTGCAAAAACGAAGTTCAAATCTTCACTTTCATTGGTTTCAGCTCCACTGTTGGGAGCTGAACCGAACCCCATTGTTGGAACATCTTCATAATCTTCTTCATCAATTTTTCAATTTCAATCTAAATTTTGATTCTTTATTGTTTTGAAAATGGAACAAGACAACCTTAACAATTGTGAGGATGAAACCTTTGTCTCTGACTCGAAGGGTGTAAAAAGAAGCATTGCGGAAAGAAGGGGTTTCAATTCAAATGCTGCAAGAATCAACACTGCTCTGTTCCGTTCTGCAACTTCGTCAACCCCTTCACCTTCCTCTGCTGCTCGATCACCTTGTCTCACCATTCCCCCTGGCATTAGCCCCACTGCGCTGCTTGATTCTCCCATCATGCTTCCAAATTCTCAGGTCATGCCATCTCCCACCACTGGCACTTTCTTCATGATGCCACCTGTCAGTCATGAAGGATCAGTTCTCACAGGCGAACAAGGGAACGTGGATCATAGTTCGTTTAGGCCTCCTTACTCTGCTTCACTTAATCAGGTTTCTAGTAACTTCCACGTGGGAAAGGGAGGAAATAGAGAGAGCCAACTACTTGCTCAAGTTCAGCCACCATTAGATTTTTCATTCTCTGCAGATTTTTCAAAAGGCCATTCTGTGAAAAATAGTGAAGTGAATTCGTACAATGATATGAAATTGGTAACTGATGCGATCGTTAATGCCAATAATGTTGATTTGCCAATGTCTGGCTCTGAGGAAGTAAGTGATGAAAGCGCTCAGCCAAAAAATGCTATCAATGGTGAGGATTTTGGAGGGCAACCTGCTTCAGAAGAACAGAAAGAAGCATCCCATGGAACAGGAGTCTTAAGGACCTCAGAGGATGGTTATAATTGGAGGAAATATGGACAGAAACAGGTAAAAGGTAGTGAGTATCCAAGAAGCTACTATAAATGCACACAACCTAATTGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGATGGTCAAATAACGGAAATTATTTACAAGGGTAATCATAACCATGCAAAACCACACCCTAGTCATCGAGCATCAGCACTTTCTACTGATGAGATTTCAGATGTGGGTGAAGACAGTAGCTTACCTAAAGTTGACAGCGGGTATGTCTGGAGAAATATTCATTCGGGATTAAAAGATACGAAACACAGTTTTGATTGGAAGGCTGATGGTCAGGAAAGGACATCATCAACTTCTGTTGTGACCGAGCTTTCAGATCCTATATCAACTAACAAAGCTAAATCTCTATGTATGTTTGAATCCGAGGACACTCCAGAGCTTTCTTCCACACTTGCCAGTCATGATGGTGACGAAGATGGGACCACTCAAGCACTTGTTTCAGCTGAAGATGAAGCCGAGAATGATGAATCAGAATCAAAAAGAAGGAAGAAAGAGAGCTATGCAGCTGAATCTAATTTACCCCCTAGGGCTGTTCGGGAGCCAAGAGTGGTTGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGCTATCGCTGGCGTAAGTATGGCCAAAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAGTGCACTAGTGCTGGTTGTATGGTAAGGAAACACGTGGAAAGGGCTTCACACAATCTAAAATATGTCCTTACTACTTATGAGGGAAAGCATAATCATGAAGTGCCCACTGCTAGAACCAACAATCAGGTAAACTCAAGTGATGGTGGTTTACCTCCCAACGGTGCTAATGGACAAGTGGCTCTTACATTACCAGGTAGTGCCGGCATTCCAAGGCCCGAAACTCATCAAACTCTTGCACATCATTTTGACAGAAAACCTGAATTTAACAATGAATTTCTGAGGCCTGGTTTGGTTGGAAGTTTTAGTAATGATATGAAGTTTGGGCCTTCTTCCCTTTGCCAAATGAAGTATCCTTCATTGAATAACACCATGTCTTATGGCTCCTATGGACTGAACCCTGAACGTTGTGCTGCTCCTCAAGCTGGATCCATTGCCTCAATGTTCCCGGATTTGCCAATGCCATTACCATTGAATCTTCCCTCATCTGGAAATTTTTCACTTGCTGGATTTAACTTCAACTGTGTAAAGCCAATGAATCCTGTCCAGTCTTTCCTTTCGGGGCAGCAAGTGAAGGACATTGATACAGGGTTCCTGAGGCCTAAACAGGAACAGAAGGATGATACTTTATACGGCTCCTGCATGCCCTCACTAGATCATGCAAATGCTTCACTCACTTCTTCTTCAGCATCACAATCCATTTATCAACGTGTCATGCAAAATTTCCCTTCATAAATCTCCTTTTTACAGTGATTAGCAACAGCAAATGTTGATGAGTTTTGTTTTGTTTAGTATTCGAAGGTCTTTCGTCCTATTTCGTTACTATTTCAGTTTTTTTAATCTTTCGAAACAAAGTATGACGTCTTTATACGAATTGCATACCAATATTTGTAACTAGTTCTTGGTAAGTAAATTTCTTGTCTTAT 2537 0.4155 MEQDNLNNCEDETFVSDSKGVKRSIAERRGFNSNAARINTALFRSATSSTPSPSSAARSPCLTIPPGISPTALLDSPIMLPNSQVMPSPTTGTFFMMPPVSHEGSVLTGEQGNVDHSSFRPPYSASLNQVSSNFHVGKGGNRESQLLAQVQPPLDFSFSADFSKGHSVKNSEVNSYNDMKLVTDAIVNANNVDLPMSGSEEVSDESAQPKNAINGEDFGGQPASEEQKEASHGTGVLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGNHNHAKPHPSHRASALSTDEISDVGEDSSLPKVDSGYVWRNIHSGLKDTKHSFDWKADGQERTSSTSVVTELSDPISTNKAKSLCMFESEDTPELSSTLASHDGDEDGTTQALVSAEDEAENDESESKRRKKESYAAESNLPPRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKYVLTTYEGKHNHEVPTARTNNQVNSSDGGLPPNGANGQVALTLPGSAGIPRPETHQTLAHHFDRKPEFNNEFLRPGLVGSFSNDMKFGPSSLCQMKYPSLNNTMSYGSYGLNPERCAAPQAGSIASMFPDLPMPLPLNLPSSGNFSLAGFNFNCVKPMNPVQSFLSGQQVKDIDTGFLRPKQEQKDDTLYGSCMPSLDHANASLTSSSASQSIYQRVMQNFPS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01192 722 Pfam WRKY DNA -binding domain 455 512 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 Pfam WRKY DNA -binding domain 241 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 Gene3D WRKY domain 441 507 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 171 535 IPR044810 GO:0003700
Pste5g01192 722 MobiDBLite consensus disorder prediction 414 429 - -
Pste5g01192 722 MobiDBLite consensus disorder prediction 44 59 - -
Pste5g01192 722 MobiDBLite consensus disorder prediction 196 239 - -
Pste5g01192 722 FunFam WRKY transcription factor 57 440 514 - -
Pste5g01192 722 Gene3D WRKY domain 230 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 ProSiteProfiles WRKY domain profile. 235 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 MobiDBLite consensus disorder prediction 293 312 - -
Pste5g01192 722 MobiDBLite consensus disorder prediction 196 210 - -
Pste5g01192 722 MobiDBLite consensus disorder prediction 381 397 - -
Pste5g01192 722 MobiDBLite consensus disorder prediction 381 434 - -
Pste5g01192 722 Coils Coil 405 425 - -
Pste5g01192 722 FunFam WRKY transcription factor 226 300 - -
Pste5g01192 722 SUPERFAMILY WRKY DNA-binding domain 239 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 SMART WRKY_cls 454 513 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 SMART WRKY_cls 240 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 ProSiteProfiles WRKY domain profile. 449 514 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01192 722 MobiDBLite consensus disorder prediction 44 63 - -
Pste5g01192 722 SUPERFAMILY WRKY DNA-binding domain 447 514 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01192 Pste-Chr5 7695661 7699539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01192 20 517 WRKY Transcription Factor Family AT5G56270 43.702 1.13e-104 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g01192 WRKY 7.6e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01192 5 7695661 7699539 Pste5g01192 5 7695661 7699539 ECH