Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01184 GTTACTGAAACCCAAACAGCGTTCTGTTCTGTCCTCTTTTCTCTTCTCTGTTTCTCCCTTTCCTCTTTCTCTCTCTCTCTCTTCTTCCAAACAAGCACCGAGTCACAGACTCACCGATCTTCCGATTCTCTTTCGTCTTGGTTTATGAGCTCGAAGGAGAGACCCACTCTTGGTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCTGCGCCGCTGGACCCTGCAGCATTTGCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGTTGCTTTCACTGGGGGTCGTACACAACCTGGAACTACCAAGCCCGATGAGGGGGACCGCCATCCATATTCTATAATAGAGTCCGAGCCTAAGCGAGAAGTCATCTTGCCATCGGTAATCTACATACAAAAGATTTTGCGGCGAAGGCCATTTCTCATCAAGAACCTTGAAAATGTCATGCGGAAATTCCTCCAGTCCTTGGAGCTTTTCGAGGAAAATGAGAGGAAAAAGTTGGCAATCTTCACAGCACTGGCATTTTCCCAGAAGCTGTCTGGTCTCCCACCAGAAACTGTGTTCCAACCACTTCTTAAAGATAACCTTGTGGCCAAAGGGCTAGTTCTGTCATTTATGACTGACTTCTTTAAGGAGTATCTGATTGATAACAGCCTTGATGATCTTATTTCAATTCTGAAACGGGGGAAAGTAGAGGAAAATCTTCTGGATTTTTTCCCCCCTACAAAAAGATCTAATGAAGCTTTCTCTGAGCATTTCGGCAAGGAAGGACTGGTGGCCTTGGTGGAGTATAATGAAAAGAAAATTTTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTAACAACACAGATAACAGAGGAGGCTGATACATCTGAAGTCATAGAGACTGTGAAGCTGAGAGTTAGAGATGCTAAATTGCCGGACATTGAAGTGGTGCGGGTCTTGTGGGATGTTTTAATGGATGCTGTTCAGTGGTCTGGAAAAAATCAGCAACAGAATGCAAATGCAGCCCTTCGACAGGTGAAAACTTGGGCAGAACTGTTGAATACATTCTGCACCAGTGGGAAACTCGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTATGAGGATGCTAAACTGATGAAGCTGTTCCCCGAGATTGTTAGATCTCTTTATGACCAGGATGTGCTGGCTGAAGATACCATTCTTCATTGGTTCCGAAAAGGGACAAACACCAAGGGCAGGCAAACTTTTGTGAAGGCGCTGGAGCCCTTTGTTAATTGGCTGGAGGAGGCTGAAGAGGAGGAGTAAGTGTGGTGGAGGTTCAGGGCTTAAGATGATAGCTTGTCTTCAGCTCTTGTACCCATTAGCTAAGATATTGGCTCTTGTTCTCACAAGTTCGATTCTAGTACTGTCAATCTGTTTTATTTCAAGTTTGTGTTTGAGTCTTTTACTATGTACTACGCCAGTGTGTTTTCCGCACGCCACTTCCATGTGTTATGCGAGTATTTACTGTATTTTGAGTGCTCTTTTTAATAATGGGTGTACGTACACCTATTCCTGTTAACTTATATCGTTTTTTCAAAGTTCAAACTATTAACGCAGCCACTGGACGTTGAAACTTTGATTTCCCTGCTTGAGTTATTATACTTCCGATGGTGTGCTTTTTGTGGTGAATGTAAACGGACGTGTGGTCCAATGCTTTATATCGTGTAAAAGTAGGATGAAGCACCCTTGGTTTACACAAAAAAGGGTTTTGTTA 1762 0.4364 VTETQTAFCSVLFSLLCFSLSSFSLSLFFQTSTESQTHRSSDSLSSWFMSSKERPTLGGTRIKTRKRNIAAPLDPAAFADAVVQIYLDNAGDLVAFTGGRTQPGTTKPDEGDRHPYSIIESEPKREVILPSVIYIQKILRRRPFLIKNLENVMRKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFMTDFFKEYLIDNSLDDLISILKRGKVEENLLDFFPPTKRSNEAFSEHFGKEGLVALVEYNEKKIFEVKLKEMKSALTTQITEEADTSEVIETVKLRVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANAALRQVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTILHWFRKGTNTKGRQTFVKALEPFVNWLEEAEEEE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01184 436 Gene3D - 268 436 - -
Pste5g01184 436 ProSiteProfiles W2 domain profile. 271 436 IPR003307 GO:0005515
Pste5g01184 436 Pfam eIF4-gamma/eIF5/eIF2-epsilon 363 436 IPR003307 GO:0005515
Pste5g01184 436 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 94 436 - -
Pste5g01184 436 FunFam ARM repeat superfamily protein 268 436 - -
Pste5g01184 436 Coils Coil 146 166 - -
Pste5g01184 436 SMART 542_3 350 435 IPR003307 GO:0005515
Pste5g01184 436 CDD W2_eIF5C_like 241 429 IPR043510 -
Pste5g01184 436 SUPERFAMILY ARM repeat 278 433 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01184 325 432 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 4.51e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01184 5 7647315 7652589 Pste5g01184 5 7647315 7652589 ECH