Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01177 ATGCCTGAAGAGGCAAGAAGAAGGATATCGGGACCCAAGAAGAAGAAGAAGAAGGAGGCTCTGTGTTTGTGTTTCTCTGTACGTCCTCAAGACTATAGCGGTTTTCTGGGTCTATGCGCTCTTAGTGGCTCCGATTCTTTCTCCACTTCCAACTTGTTTGATTTGGTTGGTTATTCTCAAAAGGTTGTGACGGATCCTTCAAGGGAAGAAAGTGGGTGTTCGAGTGGTGTGGAGTGCATTCTTGGCATTCTAAGGGCCCTTAAGATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCGCCCCACTTCACCATCTTCATCTTTCAGGAAGCGTAAGAACAACTCCAGGAAGAGGCTTGGATCAAGGGCCACTTCCTCTGAGTATTGGAGGAATGAGCCTCTCCATAGGGTCCCTGGGAGGATCTTCCTCAATGGCTCATCCCAAGTTGCATCCTTGTTCACTCAGCAAGGCAAAAAGGGCACCAACCAGGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATTTTCTGTGGAGTTTTTGATGGTCACGGACCATTTGGCCACATGGTCGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAATTGAATGCCCAGTGGGAACTCAAGGTATCTGGTGAAGAAGTCCTCAAGGAGATTAGCGTTAATACTGCAGGAAGCATGTATTCTGAAGAGGCAGCATTTACATCTGCTGATGAGGAATCTAGGGTATCTATTGATGCTGAGGAAATAGAAAAACACCCAGAAATCTTTCAGACACTTAAAGAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGACCCACCAAAGTGTTGATTGCTTCTGTAGTGGGACAACTGCTGTAACGATGGTTAAGCAGGGACGTGATCTTATTATTGGAAATGTTGGTGATTCTAGAGCTGTGTTGGGTACAAGAGAGAAAGATGATTCTCTTGTTGCTGTGCAATTAACTGTGGATCTGAAACCCAATCTTCCAGCGGAAGCAGAGAGAATTCGCAAATGTAAAGGACGTGTTTTTGCACTTCAGGATGAGCCCGAAGTTGCACGTGTCTGGTTGCCAAACAATGACTCACCTGGGCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTTAAAGATTTTGGTCTGATATCTGTTCCAGAGATGTCATACAGACGGCTCAGTGAGAGAGACGAATTTGTTGTATTGGCAACAGATGGGATTTGGGATGTGCTCTCAAACAAAGAAGTGGTGGACATTGTAGCAACTGCACCAAAGCGTTCCTTGGCAGCTAGAGGACTGGTAGAGTCAGCGGTTCGAGCATGGAGGTACAAGTATCCAACCTCCAAAGTGGATGACTGTGCAGTGGTTTGCCTATTTCTGAATGGAGGGGACAAAGTGTGCAGTGGTTCCAATGTGAAGTCCAAGGAGCAACCTGGTTCTGCCACTAGTATTCTGGAAAGGTCAGGAACTTGCAGGGAAAACAATGAGGAAGAGGAAATAGATGGCGAGTATGAAATAGAGTGGTCTGCTCTTGAAGGGGTGTCTCGTGTGAACACATTACTAAACCTACCGAGGTTTGAACCTGACAAAGAAGACAAGGGGATTAGAAAAAAGGGTTGA 1647 0.4596 MPEEARRRISGPKKKKKKEALCLCFSVRPQDYSGFLGLCALSGSDSFSTSNLFDLVGYSQKVVTDPSREESGCSSGVECILGILRALKMGSCFSAESRSPRPTSPSSSFRKRKNNSRKRLGSRATSSEYWRNEPLHRVPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAQWELKVSGEEVLKEISVNTAGSMYSEEAAFTSADEESRVSIDAEEIEKHPEIFQTLKESFLKAFKVMDRELKTHQSVDCFCSGTTAVTMVKQGRDLIIGNVGDSRAVLGTREKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEMSYRRLSERDEFVVLATDGIWDVLSNKEVVDIVATAPKRSLAARGLVESAVRAWRYKYPTSKVDDCAVVCLFLNGGDKVCSGSNVKSKEQPGSATSILERSGTCRENNEEEEIDGEYEIEWSALEGVSRVNTLLNLPRFEPDKEDKGIRKKG 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01177 548 Pfam Protein phosphatase 2C 197 447 IPR001932 -
Pste5g01177 548 Gene3D - 145 471 IPR036457 -
Pste5g01177 548 SMART PP2C_4 141 467 IPR001932 -
Pste5g01177 548 SUPERFAMILY PP2C-like 142 471 IPR036457 -
Pste5g01177 548 CDD PP2Cc 149 469 IPR001932 -
Pste5g01177 548 MobiDBLite consensus disorder prediction 480 501 - -
Pste5g01177 548 MobiDBLite consensus disorder prediction 95 125 - -
Pste5g01177 548 FunFam probable protein phosphatase 2C 33 145 472 - -
Pste5g01177 548 PANTHER PROTEIN PHOSPHATASE 116 467 IPR015655 GO:0004722|GO:0006470
Pste5g01177 548 MobiDBLite consensus disorder prediction 480 498 - -
Pste5g01177 548 MobiDBLite consensus disorder prediction 96 110 - -
Pste5g01177 548 ProSiteProfiles PPM-type phosphatase domain profile. 150 469 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01177 Pste-Chr5 7615556 7627986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01177 89 539 PP2C-type Phosphatase Gene Family AT3G02750 61.174 0.0 582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01177 5 7615556 7627986 Pste5g01177 5 7615556 7627986 ECH