Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01176 ATGATGATGAGTCAGGCCATTGATAGGCTTAACTTGTACAATATACTAGAACCATGCTACCACTTCACTGATGACAAAGAAAATGGAAGCTTACCAAAGAGTTTCAAGCAATTAGGGGTGACTGAGAGGCCTCTCCCAGTGAGGAAGAGAATGTTTGGCAGAGCTTGGCCTTTTAGAGCACCAGTCAAGCCTGGCCTTGTTACATTATGGCCCCAATTGGCAAAAACCAATCATGCCTCTAACCATGTTCCCTGTGTTAGTGATGAAGTAGCAAGTGCATGGCTAAACAACGTTGCGGTGAGGAAAGCGATTCATGCTGAATCGGAAGGTGTGGCGGGTGCGTGGGAACTATGTACTGATAGGATAGCGTACTATCACAATGCGGGAAGCATGATTCCTTACCACAAGAACCTAACCAGCCTGGGCTATAAGGCACTTATTTTCAGTGGCGACCATGATATGTGTGTACCTTTTACCGGAAGTGAGGCTTGGACCCGATCTCTGGGATATAAGATTGTAGATGAATGGAGGCCATGGATCTCAAATGACCAAGTTGCTGGCTACTTGCAAGCATACGACAACAACCTCACTTTCCTCACAATCAAGGGAGCTGGGCACACCGTGCCCGAATATAAGCCTCGGGAAGCATTGGATTTTTACAGCCGTTGGTTGGAAGGAAACAAAATTTGAGGAAATATTGCATCATCTCACTGTCGCCTAAAATAAACATATATTCCTTTACATTAAAATCATATGTAAAGGGATTATTATTTAACTATAATTTCATTCATATAACAATCCTTTCAAAGAGAGGATGTCCCAAGCTTGCAATCTCATAACCATTTTCTTCTTTCTAAGTGCGCCCCGCCCAGTCTACTTCTTGCACCTTCTAGCTTTTGCTTTTCCAACCAACTCTTATTTACCACCTCCCATAATATTGAATTTCCAAATTTTCACTTTTTATATTCATATATGTCGTTTCTAGATCAAGTAATACAAAACCCTTGCTTATTACTCCCAACAAATTGATTCAAACACATTAATCATTTAATTCGGATTAGTTCATCCAAAATATAAAAAAAACAACTGTATACTTGATTTTTAGTTCAAGTGACTTGGTTTGTGCATTTTGTGAGTGGGTAGGGGTTGGCTCAAAGGTGATTGGCGTGGCAGTGTGAAGAAGAAAATAATGTAGGTATTTTGGAATTTTAGAGATGCAAGTAGAACATAGCAGGTGTTAGGAGCGAAATCTCTTACCAACAACCCATTGGCTTCTTCTTCA 1282 0.4072 MMMSQAIDRLNLYNILEPCYHFTDDKENGSLPKSFKQLGVTERPLPVRKRMFGRAWPFRAPVKPGLVTLWPQLAKTNHASNHVPCVSDEVASAWLNNVAVRKAIHAESEGVAGAWELCTDRIAYYHNAGSMIPYHKNLTSLGYKALIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRPWISNDQVAGYLQAYDNNLTFLTIKGAGHTVPEYKPREALDFYSRWLEGNKI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01176 229 Pfam Serine carboxypeptidase 4 226 IPR001563 GO:0004185|GO:0006508
Pste5g01176 229 Gene3D alpha/beta hydrolase 3 229 IPR029058 -
Pste5g01176 229 FunFam Carboxypeptidase 84 228 - -
Pste5g01176 229 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 213 IPR001563 GO:0004185|GO:0006508
Pste5g01176 229 SUPERFAMILY alpha/beta-Hydrolases 9 226 IPR029058 -
Pste5g01176 229 FunFam Carboxypeptidase 131 226 - -
Pste5g01176 229 ProSitePatterns Serine carboxypeptidases, histidine active site. 196 213 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01176 Pste-Chr5 7609266 7611046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01176 90 229 Calmodulin-binding Proteins AT2G22960 48.571 2.49e-43 142