Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste5g01172 | AAAAAAGAAAACATTTTACAAGGGTAGAGTAAAAAAAGGAAGGAGTATAAGGAGGGAAGAGTGGGGAGTGGGGAGTGGGGAGTGGGGAGTGGGGAGTGGAGAGTGAGAGTGGGAGAGAATGTCGAACCCTGAAAAGCAGAAAGCATGGAAGGCGGAGTACGCGAAGTCAGGACGATCATCATGCAGAGCGTGCAAGAGCCCCATTCCCACCGAAGCTCTGCGTCTCGGCAAGATGGTTCAATCCACCAAATTCGATGGCCTCATGCCCATGTGGAATCACGCTTCTTGCATATTCAAGAAACCCAATCAGATCAAATCAGTTGAAGATGTTGAAAACTTAGAGTCGCTTCGTTGGGATGATCAGCAGAAGATCAGAAAATACATAGAGAGTGGCGGCAGTGGCAGTGGCAGCGGCACCGCAACAAAGTCAGCCTCCAAAGCTGTCAAAGATACTGAATATGGTATTGAGGTTTCACAAAGTTCTCGTGCTACTTGCAGGGATTGCAGTCAAAAAATTATCAAAGGAGAGGTTCGTATATCTACTAAGCCAGATGGTCAAGGTGCTAAAGGTTTGGCTTGGCACCATGCCAAGTGTCTCATGGAACAATCACCTTCAATTCAAGTGGATAAGTTATCTGGATGGAATAGTCTCTCACCTTCTGATCAATCAGCTGTCTGTGACTTTGCTAAGAACGGTCATCCTTTGACTAAGGGGGGTGGTAGTGGTACAAACATTAAGATTGAAGAGGGTAAAGAATCCACACAACAGCACACTTCCAAAGGTGGCATAAAACGAGGGAAGGATGCCAACAGTGAACGGAAATCGAAAGTTGCTAAGGCCAAGGGAGATTTGTCTGTGGGCAGTGTGTTGGTGAAAAATTATAATGAACCAGGGGAAGCTTGTGCTCTGGAGTATAAACTGGAGGCACAGAGCAAAGAACTCTGGGCTCTCAAGGATGATCTCAAAAAGCACGTGACAACAACAGAGTTGCGGGAAATGCTAGAAGTCAATGGTCAAGATTCAACAGGATCAGAGCTTGATTTACGTGACCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGGCCTTTGCCCATTATGTTCTGGCTTTCTTCGTTACTCTGGAGGAATGTACCGGTGCAACGGATACATATCTGAGTGGAGTAAATGTTCTTACTCTACCTGTGAACCAAAACGTGTTGAAGGGAAGTGGAAAATCCCAGAAGAAACAAGTAATCAGTACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAGACCAGTTAGGATATTGCCTGTTGTATCACCAAAGAAATCTGCTGAAAGTCAAATTACTGCTAGTCGGCATCAATCATCAAACAATGAAAATTTGCAAGATTTGAAAGTTGCTATCTGTGGATTACCTAATGACTCTATTGTATTACTTCTTCCTTTTTTTTCCTTAACACTTGAGGAATGGAAACGCAAAATAGATGCCATGGGTGGGGTGTTTCATGCAAAAGTAAAGAAAGATACTAACTGCTTGGTGGTTGGTGGATCACTCAATGATGAAGCTGAGATGCGGAAGGCAAGGAGGATGAAAATTCCAATAGTCAGAGAGGACTATTTGATTGACTGCATAGAAAGAAAGAAGAGACTTCCATTTGATATGTACAAGGTTGAGATGATTGGTGAGGCTTCTAGCATGGTCACTATTAAAGTGAAGGGACACAGCGCTGTTCATGAGGCTTCTGGTCTGCAGGATTCCGGTCACATACTTGAAGAAGGGAAAAGCATATATAATACAACTTTGAATATGTCTGATTTGTCTACTGGTGCAAACAGTTACTATGTTCTCCAGATAATCCAAGAAGATAAGGGGTCAGATTGCTATGTGTTTCGTAAATGGGGTCGAGTGGGAAATGACAAGATTGGAGGAAATAAGCTGGAGGAAATGGCAAAATCTGATGCCATACGTGAATTCAAACGATTATTCTATGAGAAGACTGGAAACCCTTGGGAGGCATGGGAACAAAAGACTATTCAGAAGCAACCTGGGAGATTTTTTCCATTGGATATTGACTATGGAGTTAACAAACAGATCTCAAAAAAGAAAAAAACTGATACCGAAAGTAAACTACCCCCTCCATTAATAGAATTGATGAAAATGCTCTTCAATGTGGAAACATACAGAGCTGCCATGATGGAATTTGAGATTAATATGTCTGAAATGCCACTTGGGAAACTGAGCAAAAGTAATATCCAAAAGGGGTTTGAAGCATTGACAGAGATACAAAATCTGTTAAAAACTAGCAATCCCAATCCATCTGTCAAGGAAAGCTTACTTATTAATGCCAGCAACCGGTTCTTCACTGTGATCCCTTCTATTCATCCACATATTATTAAGGATGAGGATGATTTTAACTCCAAGGTGAAAATGTTAGATGCCCTTCAAGACATTGAAATAGCCTCAAGATTAGTTGGATTTGATGCCAACAATGAAGACTCTATTGATGATAATTATAAGAAGCTCCACTGTGATATATCTCCACTTCCTCACGATAGTGAAGATTTTTGTTTAATTCAGAAGTTTCTCCATAATACGCATGCTCCCACACATACGGACTGGAGTCTTGAGCTAGAAGAAGTTTTTTCACTTGAAAGGGAAGGAGAATTTGATAAGTTTGCTCCTTACAGGAATAAACTTGGTAACAGAATGCTCCTATGGCATGCCGGAGATGAAAATGTGTACAAATTTGAGTTAGATAACTTTAACAAATATATTCTCTATGTAGGTTCTAGATTGACAAACTTTGTGGGCATTATTAGCCAAGGACTCAGAATTGCACCTCCTGAAGCCCCAGCAACTGGCTACATGTTTGGCAAAGGGGTTTATTTTGCTGACCTAGTCAGCAAAAGTGCTCAGTATTGCTACACTGACAAGAAAAATCCTGTTGGTCTAATGCTTTTGAGTGAAGTTGCACTTGGAAATGTCTATGAGCTCAAGAAAGCCAAGTATATGGATAAACCTCCTGAAGGAAAGCACTCGACTAAAGGACTGGGCAAGAAAATGCCTCAAGAATCAGAATATGTAAAGTGGAGGGGTGATGTCACTGTTCCATGTGGCAAACCAGTGCCATCAAATGTCAAGAGTTCTGAGCTCATGTACAATGAGTACATTGTTTATAATACTGCTCAAGTTAAGATGCAGTTCTTGTTGAAGGTGAGGTTTCATCACAAGAGATGAGAATTGGAGTTAAGTTTTGCTGTTCTTCTGGAATATCTATAGTAAGCAGTTTTTTGTGGTCCGTCTGGGATTCTCTTGAATTGTTTTGGACTTCTGGTAAGGTCTCATTTTGAGTGAACTGGAGATCTTTCAACTTTCTTTGGGGGGAGGGAGGGGGGCCGTGTAAATGCAGGTATCTATCTAGTTGAAAACCTGTCACTTATGGCAGAAATATCTCATGCATGTGATCTGTTTTTTTGTATAGAACTTCTCAACCTTGTCAATTGTTATTGAGTTCTTCCATTTCTAGTTTGCA | 3521 | 0.4127 | MSNPEKQKAWKAEYAKSGRSSCRACKSPIPTEALRLGKMVQSTKFDGLMPMWNHASCIFKKPNQIKSVEDVENLESLRWDDQQKIRKYIESGGSGSGSGTATKSASKAVKDTEYGIEVSQSSRATCRDCSQKIIKGEVRISTKPDGQGAKGLAWHHAKCLMEQSPSIQVDKLSGWNSLSPSDQSAVCDFAKNGHPLTKGGGSGTNIKIEEGKESTQQHTSKGGIKRGKDANSERKSKVAKAKGDLSVGSVLVKNYNEPGEACALEYKLEAQSKELWALKDDLKKHVTTTELREMLEVNGQDSTGSELDLRDRCADGMMFGALGLCPLCSGFLRYSGGMYRCNGYISEWSKCSYSTCEPKRVEGKWKIPEETSNQYLKKWFKSQKGKRPVRILPVVSPKKSAESQITASRHQSSNNENLQDLKVAICGLPNDSIVLLLPFFSLTLEEWKRKIDAMGGVFHAKVKKDTNCLVVGGSLNDEAEMRKARRMKIPIVREDYLIDCIERKKRLPFDMYKVEMIGEASSMVTIKVKGHSAVHEASGLQDSGHILEEGKSIYNTTLNMSDLSTGANSYYVLQIIQEDKGSDCYVFRKWGRVGNDKIGGNKLEEMAKSDAIREFKRLFYEKTGNPWEAWEQKTIQKQPGRFFPLDIDYGVNKQISKKKKTDTESKLPPPLIELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLKTSNPNPSVKESLLINASNRFFTVIPSIHPHIIKDEDDFNSKVKMLDALQDIEIASRLVGFDANNEDSIDDNYKKLHCDISPLPHDSEDFCLIQKFLHNTHAPTHTDWSLELEEVFSLEREGEFDKFAPYRNKLGNRMLLWHAGDENVYKFELDNFNKYILYVGSRLTNFVGIISQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCYTDKKNPVGLMLLSEVALGNVYELKKAKYMDKPPEGKHSTKGLGKKMPQESEYVKWRGDVTVPCGKPVPSNVKSSELMYNEYIVYNTAQVKMQFLLKVRFHHKR | 1035 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste5g01172 | 1035 | CDD | parp_like | 664 | 1030 | - | - | |
| Pste5g01172 | 1035 | Pfam | WGR domain | 554 | 632 | IPR008893 | - | |
| Pste5g01172 | 1035 | ProSiteProfiles | BRCT domain profile. | 413 | 514 | IPR001357 | - | |
| Pste5g01172 | 1035 | Gene3D | BRCT domain | 396 | 516 | IPR036420 | - | |
| Pste5g01172 | 1035 | ProSiteProfiles | PARP alpha-helical domain profile. | 664 | 782 | IPR004102 | GO:0003950 | |
| Pste5g01172 | 1035 | FunFam | Poly [ADP-ribose] polymerase | 657 | 798 | - | - | |
| Pste5g01172 | 1035 | Pfam | PADR1 (NUC008) domain | 311 | 360 | IPR012982 | GO:0008270 | |
| Pste5g01172 | 1035 | Gene3D | - | 654 | 798 | IPR036616 | GO:0003950 | |
| Pste5g01172 | 1035 | Pfam | BRCA1 C Terminus (BRCT) domain | 433 | 501 | IPR001357 | - | |
| Pste5g01172 | 1035 | SUPERFAMILY | Domain of poly(ADP-ribose) polymerase | 664 | 799 | IPR036616 | GO:0003950 | |
| Pste5g01172 | 1035 | SMART | WGR_cls | 554 | 637 | IPR008893 | - | |
| Pste5g01172 | 1035 | ProSiteProfiles | WGR domain profile. | 543 | 642 | IPR008893 | - | |
| Pste5g01172 | 1035 | MobiDBLite | consensus disorder prediction | 192 | 240 | - | - | |
| Pste5g01172 | 1035 | Gene3D | - | 252 | 320 | - | - | |
| Pste5g01172 | 1035 | SMART | BRCT_7 | 415 | 504 | IPR001357 | - | |
| Pste5g01172 | 1035 | SMART | PADR1_2 | 309 | 362 | IPR012982 | GO:0008270 | |
| Pste5g01172 | 1035 | Gene3D | - | 1 | 106 | IPR036957 | GO:0003677|GO:0008270 | |
| Pste5g01172 | 1035 | Gene3D | - | 107 | 209 | IPR036957 | GO:0003677|GO:0008270 | |
| Pste5g01172 | 1035 | FunFam | Poly [ADP-ribose] polymerase | 251 | 320 | - | - | |
| Pste5g01172 | 1035 | MobiDBLite | consensus disorder prediction | 222 | 240 | - | - | |
| Pste5g01172 | 1035 | FunFam | Poly [ADP-ribose] polymerase | 321 | 382 | - | - | |
| Pste5g01172 | 1035 | FunFam | Poly [ADP-ribose] polymerase | 107 | 221 | - | - | |
| Pste5g01172 | 1035 | PIRSF | NAD_ADPRT | 3 | 870 | IPR008288 | GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287 | |
| Pste5g01172 | 1035 | PIRSF | NAD_ADPRT | 865 | 1035 | IPR008288 | GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287 | |
| Pste5g01172 | 1035 | FunFam | Poly [ADP-ribose] polymerase | 4 | 106 | - | - | |
| Pste5g01172 | 1035 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 8 | 97 | - | - | |
| Pste5g01172 | 1035 | SUPERFAMILY | BRCT domain | 433 | 514 | IPR036420 | - | |
| Pste5g01172 | 1035 | SUPERFAMILY | WGR domain-like | 522 | 647 | IPR036930 | - | |
| Pste5g01172 | 1035 | Gene3D | - | 799 | 1035 | - | - | |
| Pste5g01172 | 1035 | CDD | WGR_PARP1_like | 544 | 649 | - | - | |
| Pste5g01172 | 1035 | ProSiteProfiles | Generated from MSF file: '/work/www/psmaker/tmp/pfmake.input.483415'. | 252 | 394 | IPR047572 | GO:0008270 | |
| Pste5g01172 | 1035 | FunFam | Poly [ADP-ribose] polymerase | 411 | 523 | - | - | |
| Pste5g01172 | 1035 | SUPERFAMILY | ADP-ribosylation | 798 | 1034 | - | - | |
| Pste5g01172 | 1035 | ProSiteProfiles | Zinc finger poly(ADP-ribose) polymerase (PARP)-type profile. | 10 | 93 | IPR001510 | GO:0003677|GO:0008270 | |
| Pste5g01172 | 1035 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 112 | 194 | - | - | |
| Pste5g01172 | 1035 | Gene3D | - | 321 | 381 | IPR038650 | - | |
| Pste5g01172 | 1035 | PANTHER | DNA LIGASE | 113 | 1033 | - | - | |
| Pste5g01172 | 1035 | SMART | zf_PARP_3 | 117 | 191 | IPR001510 | GO:0003677|GO:0008270 | |
| Pste5g01172 | 1035 | SMART | zf_PARP_3 | 13 | 90 | IPR001510 | GO:0003677|GO:0008270 | |
| Pste5g01172 | 1035 | Pfam | Poly(ADP-ribose) polymerase, regulatory domain | 665 | 795 | IPR004102 | GO:0003950 | |
| Pste5g01172 | 1035 | ProSiteProfiles | Zinc finger poly(ADP-ribose) polymerase (PARP)-type profile. | 114 | 186 | IPR001510 | GO:0003677|GO:0008270 | |
| Pste5g01172 | 1035 | ProSiteProfiles | PARP catalytic domain profile. | 789 | 1035 | IPR012317 | GO:0003950 | |
| Pste5g01172 | 1035 | Pfam | Poly(ADP-ribose) polymerase catalytic domain | 809 | 1031 | IPR012317 | GO:0003950 | |
| Pste5g01172 | 1035 | ProSiteProfiles | SAP motif profile. | 283 | 317 | IPR003034 | - | |
| Pste5g01172 | 1035 | Pfam | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region | 13 | 89 | IPR001510 | GO:0003677|GO:0008270 | |
| Pste5g01172 | 1035 | Pfam | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region | 117 | 188 | IPR001510 | GO:0003677|GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste5g01172 | Pste-Chr5 | 7591895 | 7602374 | Dispersed |