Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01149 ATGGTGGGAGAGGCATCGTCGATGGCTTTGATAATAGAATGGGAGCGGGTAAAGATATTGGGGGAGGGATCGTACGGCACGGTGTTCCTAGCTATGCTGACTGCTCCTGAAGAAACGAAAGGGACGATGATCGCTGTCAAGACTTCAAAGCCTCACGGCTTAGATTCTTTACAGAAAGAAGGAACCATTTTGGATTCATTCTTTGGCTGCAAAGAAATCCTTCAATGCATTTGGGCCTTATCCACCATTGACAATGGTCGCACTGTCTACAATCTTCTGATGGAGTTTGCCCCCTGCGGTTCTCTTGGAGACTTCATCAGAAACAAACAATTGCCGGAGACTCAAGTCAGAGTTTACGCCCGCATGCTTCTCAATGGCCTTTCTCTCATTCATCAATCTGGGGTTGTTCATTGCGACCTCAAACCTGATAACATCCTTCTCTTCCCTCCCTACGACCATGGTGTAGACTACCAACTCAAGATTGCTGATTTTGGACTCTCCAGAACCAAAGATGAGGACTTTGATCCTGATTTTTGGAAGATCAAGTTCAGAGGTTCTCCCTTTTACATGTCACCAGAATCAGTGATGGGACAAATTGAAACACCATTGGATATATGGTCTCTGGGCTGCACGGTAATCGAGATTATCACTGGGTTACCTGCATGGCACCACATTCCTACCCGATCACACTTAATGTTCAAACTTGCATTCCTTAAAGAAATCCCACCTATACCTTCTGGCCTCACTCCTCTTTGTGAAGATTTCTTGACCAAGTGTTTAATCACGGACCCTAATCAGAGATGGACTGCCAACATGCTTCTCAACCATCCTTTTATTTCTGCTACCAACTGA 852 0.4531 MVGEASSMALIIEWERVKILGEGSYGTVFLAMLTAPEETKGTMIAVKTSKPHGLDSLQKEGTILDSFFGCKEILQCIWALSTIDNGRTVYNLLMEFAPCGSLGDFIRNKQLPETQVRVYARMLLNGLSLIHQSGVVHCDLKPDNILLFPPYDHGVDYQLKIADFGLSRTKDEDFDPDFWKIKFRGSPFYMSPESVMGQIETPLDIWSLGCTVIEIITGLPAWHHIPTRSHLMFKLAFLKEIPPIPSGLTPLCEDFLTKCLITDPNQRWTANMLLNHPFISATN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01149 283 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Pste5g01149 283 CDD STKc_MAPKKK 13 279 - -
Pste5g01149 283 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 13 279 - -
Pste5g01149 283 Gene3D Transferase(Phosphotransferase) domain 1 6 283 - -
Pste5g01149 283 ProSiteProfiles Protein kinase domain profile. 14 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01149 283 SMART serkin_6 14 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01149 283 Pfam Protein kinase domain 15 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01149 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Pste5g01149 283 SUPERFAMILY Protein kinase-like (PK-like) 14 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01149 Pste-Chr5 7496626 7497477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01149 12 280 MAP Kinase Kinase Kinase AT3G50310 39.130 7.05e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste5g01149 Pkinase 4.5e-47 CL0016