Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01122 ATGTATCTCCGGTCCTATCCAGATCCGAAAATACAGGAGCATGCTGTGACAGCAATTTTGAATTTATCAATTGATGAGGGTAATAAGAGACTTATATCCAAAGAAGGTGCCATTCCAGCTATCGTAGAAGTTTTGGAAAATGGGAGTTGTGTTGATTTGTTAAGAAATGGAAGAGTCAAAAGGAAGAAAGATGCAGCTACAGCTCTTTTTAACTTACCTCTCAGCCGGGCAAATAAAGGTAGGGCTATTAGAGCTGGTATTGTAACACCCTTCAATTGCTCAAGGACAAAAACTTGGATGACCAAGTTTTTGTTGATTGATGAAGCATTCTCCATTCTGTTACTTCTGTATCAAATTCAGAAGCAAGACAAGAGAATTGGACAACTTACTTTCATTGAAACCCTTGTTGAGTTCATGAGAGAAGGGAGTCCCGAGAACAATTAA 444 0.3874 MYLRSYPDPKIQEHAVTAILNLSIDEGNKRLISKEGAIPAIVEVLENGSCVDLLRNGRVKRKKDAATALFNLPLSRANKGRAIRAGIVTPFNCSRTKTWMTKFLLIDEAFSILLLLYQIQKQDKRIGQLTFIETLVEFMREGSPENN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01122 147 PANTHER U BOX DOMAIN-CONTAINING 50 143 - -
Pste5g01122 147 SUPERFAMILY ARM repeat 5 91 IPR016024 -
Pste5g01122 147 Gene3D - 2 146 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01122 Pste-Chr5 7348021 7348629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01122 1 146 U-box Gene Family AT5G42340 49.438 1.46e-37 133