Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01120 CAAACGGGGTGTGACCTGTTATCCCAGAGAGAGAGACACGAACCTAAAACTCCTTCAATTATTCTCTTCAAAATCTTTCAAAGGAGTGAAAGGGCAAAGATGGTGGGTGCAATTAAAGCAGCAGTTGGAGACGCAGTGTTGACTTTCATGTGGGTGTTCTGTTCTTCTGTGTTGGGAATTGCTTCTGGGGCCATATCCAATGCTCTTGGCGTTCAAAACATCACCTACAATGGTTTTCCTTACCCTTCGTTGCTCGTCACCATTACCCTCGTTTTTATACTCGTTTTTCTTTTCACCCTCCTCGGCAATATCCTTGGTGGGGCCAGCTTCAACCCTACCGGCACCGCTTCCTTCTACGCCGTTGGTCTCGGCTCTGATACTCTCTTCTCAATGGCGCTTCGTTTCCCTGCGCAGGCGGCTGGTGCTGCTGGTGGTGCAATGGCAATTATGGAAGTGATTCCTGCCAAGTACAAACACATGATTGGGGGACCTTCTTTGAAAGTGGATGTTCACACTGGGGCTGTTGCTGAAGGGGTGTTGACCTTTGTGATTACCTTTGTTGTTCTCCTTATCTTCCTCAAGGGCCCTCGAAGTGATTTGTTGAAGGTTTGGTTGTTGGCCACTGCAACAGTAGTTTTGGTCATAGTTGGATCTGCCTACACTGGCCCAGCCATGAATCCTGCCAATGCCTTTGGTTGGGCATACTTAAACAACTGGCACAACACATGGGACCAATTCTATGTATACTGGATTTGTCCCTTCGTTGGAGCAATATTGGCTGCTTGGCTGTTCCGTGCTATCTTTCCCCCTCCACCACCACCAGAAGTAAAACAGAAGAAAGCATGAAGAGGGATTGTAGATTTGGTTCTTCATGTCAATTGTTAAGCATAATGGTACTACTGCATTAAGAATCCTCTTTAATTTATATAATTTCTTCTTCATTCTCTCTTCTGTTTCTGAACGCCATCTTTCTGCTTATAATTGAACGTTAGATTGAGCGCAAAATCAGATCTGAAAATGTTCCTGTTAAATTGCAAGGTTATGTTTTGGCCCATAAGTTCGGTATCCATGAAGGAAAAAAATGTAAAATTTTAGTATCAAGATTGAATACTGATTTTATTAGCATTAATGTAAGCTAATAACGTGTTTGATCTAGTCCTAAAAGTGGTTTTTCAGGATTAATGAAAAGCTAGTAATTATGACTTCCATATTTTGTAGAATAATGTTATTGATGTGATTTCTGGCTTGTTAACGTGTTTTCAAACACGCACAGCACACATTAAGAGCCTGATGTTTTTAGTTTGAAAGCTGCAAAAGCGAAAGGTTAGGCTTTTATATTAATGTGTTGGTTTAACTAACTGATAGTGTCTATGGATATATGTCGTGTGGGTTTTAAAATAAAATTCCTTCTCATATTGATGCAGAAGCTTACAATCATAGTTTAATAATGTCTCAGTGTATGGTGTCTAGCGAGGGGAAATGTGTACAATTTTATTCTCGCAAACAAAGATCATTTTAAGATTTAGATTTGAACTTAAGATGGTTACCAAGGTAGTAACCATTCCGTTAGTATAGTCAAATCAAGGCTTGCC 1592 0.4077 QTGCDLLSQRERHEPKTPSIILFKIFQRSERAKMVGAIKAAVGDAVLTFMWVFCSSVLGIASGAISNALGVQNITYNGFPYPSLLVTITLVFILVFLFTLLGNILGGASFNPTGTASFYAVGLGSDTLFSMALRFPAQAAGAAGGAMAIMEVIPAKYKHMIGGPSLKVDVHTGAVAEGVLTFVITFVVLLIFLKGPRSDLLKVWLLATATVVLVIVGSAYTGPAMNPANAFGWAYLNNWHNTWDQFYVYWICPFVGAILAAWLFRAIFPPPPPPEVKQKKA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01120 281 FunFam Aquaporin SIP1-1 35 280 - -
Pste5g01120 281 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01120 281 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01120 281 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01120 281 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01120 281 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01120 281 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01120 281 PANTHER AQUAPORIN SIP1-1 36 280 IPR044222 GO:0015250
Pste5g01120 281 Pfam Major intrinsic protein 34 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste5g01120 281 Gene3D Glycerol uptake facilitator protein. 32 273 IPR023271 -
Pste5g01120 281 SUPERFAMILY Aquaporin-like 33 277 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01120 Pste-Chr5 7330522 7336105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01120 35 281 Major Intrinsic Protein MIP AT5G18290 55.645 7.59e-85 252