Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01105 ATGATGGTAGGAAAACTCATTAAGATTAGAGACAAGACAAACGTAGTGCGTGAAGCTGCGAATTATGTGAAACAACTTGAAGAACGTGTGAAAGAGCTAGAAAATAAAAAGAAATCAATAATAGTTGTGAAGAAAACGGTAGTCTCCATAAATAACGAAGCCTCTGGGGATGCATGTGTGGAAGAACTCCCCGAAGTGAAAGTAACTGTTTTAGATAAGGATGTGCTCATTGGAATCCATTGTGAGAAACAAAACCAGAGTTTACTCAAAATATTCTCATGTCTTCACAATCTCCATCTTTCTATAACCCGTACCAGCATGTTGGCATTTGGTACTTCCACTCTTCAAATTACCATTATTGCTCAGATGGATGACCAATATAACATGACAATTGATGATATAGTACAAGCGCTGCTGCGACAATATTGCTTATTGAGTTTGAAGTCACAGGATATGCAAAAGTGA 465 0.3742 MMVGKLIKIRDKTNVVREAANYVKQLEERVKELENKKKSIIVVKKTVVSINNEASGDACVEELPEVKVTVLDKDVLIGIHCEKQNQSLLKIFSCLHNLHLSITRTSMLAFGTSTLQITIIAQMDDQYNMTIDDIVQALLRQYCLLSLKSQDMQK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01105 154 PANTHER BHLH TRANSCRIPTION FACTOR 6 138 - -
Pste5g01105 154 Coils Coil 9 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01105 Pste-Chr5 7238129 7241427 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01105 7 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.972 1.06e-24 95.5