Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01100 ATGTCGAATCAGGTCGTGAAAGTTCGAAGGGACACGATTGCAGCATGCATGACTTGCCCACTCTGCAACAAGTTGTTCAGGGAAGCCACAACCATATCCGAATGTCTTCACACGTGTGAGCCCTCCTTTCCAAAATTTCTCCAATTTCTCTTCTTCCTTCACTGTTCTTCCAGATGGGGGAGCATCTCCACTTTGCGTAACCGGAGGGAGATATGGGTATTTCTTTGCAGGAAATGCATCTATGATAAAATTACGGATGAGGAAATAGAATTCTGTCCAATATGCAACATTGATTTGGGGTGTGTTCCAATCGAGAAACTGAGGCCGGACCACAGTTTGCAAGATGTAAGGGCAAAAGTTTTCCCCTTAAAGGGAAGAAATGTGAAGGCACATGAAACAGTCTCCTCAGTACCATTACCGGCTAGGAGAAAGGAGAGATCTCTTTTGTCTTTGGTGGTTAGCACTCCAAGGGTATCTACACAGGCAACAATGACAGGAAGAAGAACAAAACCCACAAGAAAGGCTAGTGGATTGCGGTCCACTAGTTTTTCCATTGAAAAGCCCATTAAAAAAGAAGAAGAATTACTGGAAGATCGTCCTGAGAGTTCAAGCTCACCTGACACTTCAAATAAGTTTGCTCAGAATTCTGGACAGAGTATGTCCCCTTGTGAGGGTAGTCAATCCATACCAAATAAAGGATCAGAGAATGGTGCCGAACCATGGGATGCAAAATTGGATCTTTGGAAACCTTTGAATTGTTTGGTAGAGGTTGCAAGTAGGAGTAAATCTTTCAAGTCTAATGTTCAAGGGTTGGATGCTAAATTAGAAAACGCTCAAGTAAATGAGAGTGACTCTCCAGTGCAGAAAACCAAAAATAAGGAAAATAAACGAAAGGCAAAAGTTGAGGATGAAAAGATTAGCCCTTATCCTGTCTCTTCCGATATCACAAAACCCAATAAATTGCGCAGAATTCGCAAGAAAAAGGAGCCTGCTTCAGGAGAATCAGGCATATCACCCCAAGCTGTGGTGGATTCTGCCAGCAATAAACTCTCTAGGAGTGGTCCAATTTGGTTCTCCTTAGTAGCTTCTGAAAATCAGGAAGGAAATGCACCCTTGCCCCAAATTCCTGCAAGTTATGTTAGAATAAAGGATGGTAGTGTACCAGTCTCGTTCATCCAAAAATACCTTATGAAGAAATTAGATTTGACCAGCGAAACAGAGGTTGAGATAAAATGTATGGGACAACCAGTGCTTCCTACATTGCAGCTATATAATTTGGTTGAGTTGTGGCTGGATACGGCGTCCACTTCACAGAGAATTCCTGCAACTATTGGGTCCTCTGCAAAGGATTTTGTGATGGTCCTGGCTTATGCTCGGAAAGTTCCAAACCCTTGATCATTGATCATGATACCCCTTTCATACTTTTAATGCACCATAATCTTCTTCATAGCAGTCACTTACCATCGCCACTGTGGAGAATAGGATAAGATAGGCCAAATAAATTATAAAGAAATTCTCTCCATACAAGCGTAGCTTCTGTTCATTAATGTAGGCATCCTGATCTGTTGTCATTGTAATGTTCATTATATCCTGATTTTTCAAGACCATTTTTTTTAAAAAAAAAATGCTCATTCCAATAATTTGGAATGCGCATGTGACTTTAGATATAAGAAGCTACGGGCCACCAAGCCTGGTTAGAACTTAGAAGAGGTGATTTGTTGACAATTTGATATTTTAATCAAGAGGATTCTGTTTTTTACCCTAAACTAATGC 1773 0.4095 MSNQVVKVRRDTIAACMTCPLCNKLFREATTISECLHTCEPSFPKFLQFLFFLHCSSRWGSISTLRNRREIWVFLCRKCIYDKITDEEIEFCPICNIDLGCVPIEKLRPDHSLQDVRAKVFPLKGRNVKAHETVSSVPLPARRKERSLLSLVVSTPRVSTQATMTGRRTKPTRKASGLRSTSFSIEKPIKKEEELLEDRPESSSSPDTSNKFAQNSGQSMSPCEGSQSIPNKGSENGAEPWDAKLDLWKPLNCLVEVASRSKSFKSNVQGLDAKLENAQVNESDSPVQKTKNKENKRKAKVEDEKISPYPVSSDITKPNKLRRIRKKKEPASGESGISPQAVVDSASNKLSRSGPIWFSLVASENQEGNAPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTSETEVEIKCMGQPVLPTLQLYNLVELWLDTASTSQRIPATIGSSAKDFVMVLAYARKVPNP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01100 464 MobiDBLite consensus disorder prediction 202 234 - -
Pste5g01100 464 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 460 IPR044807 GO:0004842
Pste5g01100 464 MobiDBLite consensus disorder prediction 275 339 - -
Pste5g01100 464 MobiDBLite consensus disorder prediction 154 240 - -
Pste5g01100 464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 138 IPR013083 -
Pste5g01100 464 MobiDBLite consensus disorder prediction 185 201 - -
Pste5g01100 464 MobiDBLite consensus disorder prediction 287 307 - -
Pste5g01100 464 MobiDBLite consensus disorder prediction 154 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01100 Pste-Chr5 7206730 7212902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01100 2 383 C3H Transcription Factor Family AT2G30580 48.303 4.91e-101 304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01100 5 7206730 7212902 Pste5g01100 5 7206730 7212902 ECH
Pste5g01100 5 7206730 7212902 Pste4g02033 4 14941043 14947547 PCT