Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01093 ATGCAAACTTTCCTCTGGTCCCTTCTCCTTTTCTTCTTGTCATGTGCATTTCAACAACTAGCCTCATCTCAACCATTGTTCTTCACCAACACCAACACCAACACCAACACCAACAGAAGGATCCTCCATGAACCCTTTGTTCCAGTCCCTCCTTCTCAACCCAAAAAGGAAAAACCCAAATACCCTTCATCAGCCACCACCTCTATAACAACTACACCAGCTACAACAACACCAACTCAATCACCATTTTTCCCATTATACCCTTCTTCTCCTCCTCCTCCTTCTCCTTCTCCGATCACCTTTGCCTCCTTTCCTGCCAACATTTCCTCCCTCGTTCTCCCTCACTCCCCCAAACCCAATTCCTCCAACTCCAACCTCCTTCCCCTTGCTCTCTCCGCCCTCTCCGCCGCTGCACTCGCCGTCCTTATCTCCGCCTTCGTCTGTTACCACCGCCGCCGCCGCCGCAACGCTCCCCACGACGCCGCTGCCAAATTCCTCCGATCCGATACCGAACTCCGCCCTCTCCGGGCCAATGCTGAAACCGCCGTCGAAAAACACAAGCTCCGCCACACCTCCTCCGCCAGCTCCGAGTTTCTCTACCTCGGCACTGTCGTTAACTCGCACGTAATTGAAGAGGCCGTCGAAGTTTCCGACTCCGGTGACGACCGGAAAATGGAATCGCCGGAGCTCCGCCCGCTACCGCCACTCACGCGACAAGCTTCCTTGCCGCCTCCTCCTCCTCCGCCGCCGCTGCGCGACGAGACGGGGTTCACTACCGCGGAGGAGGACGATGATGCCGACGAGGAGTTTTACTCTCCGAGAGGTTCGTCGTTGGGAGGCTCCGGCGGAACCGGATCTTACTCCCGGCGAGTTTTTGCCGCCGGAAGAAGTGTACCGTCTAGTTCGTGTCCTTCCTCTTCTTCCGGCTCGCCGGAAAGGTCTCACTCTATGGCGTACTCGCCGAGTTCCCGGAGAACACAGCCGGAAAATTACAACCACCAACACGTTCCATCTTCTTCTCCTTCGCTGTGCTCTACACCAGATAGGGTTTTCACTGAACATAATTCAAACGAAGCATTAAATGCATGTGCACGTGCACATGCACATGCACACGCATCATCATCACCGGAAAAAAATGAAAATGCATTGTCACCACCACCGAGACTATCTAATGCTTATTCGTCTTCTGCTTTTTCTCTTCCCTCCTCACCGGAGCAGGTGACACGTCATCACACTTTTGAGCAGTCTCCCAGAATGTCAAGTGTCTCCGACGGACTAATGTTACCGGGATTGTCATCGGTGCCTTTGTCACCCGCCCTATTATCATCACCGGAAACCGAAAGGGGAACTTTTAATGGATTGGGAGCAGGTTCTTACGGTGCGGCTGCGCCCCAGAGGAAACACTGGCACATTCCAGTGCTCTCACTAACAGCACCCTTTGATGAAATTGCAACTGTTCCAGTTCCTCCACCTGTGCCACAGAGAAAGCACTGGCAGAATCCAGGCCCTGCTCCGCCACCACCTCCGCCACTACCACGGCAAAGGAAGCAGTGGGGAGGAGTGCCGGAGCCAGGGCCATCAACACCTATTGGTCAACCGGTGTCTAGGCCGCCGGAGCTGGTGCCTCCTTCGAGGCCTTTTGTGCTGCAAAACCAAGCAACCAATGTAGAGTTGCTGGGGGAAAGTCAAGAGACTTGTAAACCAAAATTGAAGCCCTTGCATTGGGACAAAGTCAGAACCACCTCTGATCGTGAAATGGTGTGGGATCAGATCAAGTCCAGCTCGTTTAAATTGAATGAGAAAATGATTGAAACATTGTTTATAGTGAACACACCAAAACCCAAGGATGCAACTACAAATTCAGTTTCTCACCAGCCAAATCAGGAGGAAAGAATACTCGATCCTAAAAAATCTCAAAATATTTCAATCTTGCTGAAAGCGCTTAATGTCACTATAGAAGAAGTGTGTGAGGCACTTTTAGAAGGTAGTACTGATTCACTTGGAGCAGAATTACTTGAAAGTTTATTAAGAATGGCACCAAGCAAGGAAGAAGAACGTAAGTTAAAGGAACATAAAGATGACTCACCAACCAAGCTTGGTCTGGCTGAAATTTTTTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGATTGAAGCAATGCTTTACATAGCCAATTTTGAGTCTGAAGTGGAGTATCTTACGACATCCTTTCAAGCTCTAGAGGCTGCCTGCGAAGAGCTGCAACAAAGTAGAATGTTCTTGAAGCTTCTGGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACCAATCGTGGGGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAGCTGGCCGATGTTAAAGGTGCAGATGGGAAAACCACTCTACTGCATTTTGTTGTACAGGAAATTGTTCGAACCGAAGGTGCTCGTCTCTCTGGCACTAGTCAAACTCCAAGTACTTTGAGCGAAGACACCAAGTGTAGGAGGCCTGGCCTACAAATTGTATCAAGTCTAAGTTCCGAGCTAGCAAATGTGAAGAAGGCTGCTGCTATGGATTCTGATGTTCTCAGCAGTGATCTCTTAAAACTTTCCAACGGAATTGCAAATATAGCAGAAGTTGTGCAATTAAACAACCAAACCAGGGGATCAGATGAGAACAGTCAGAAATTTACGGAATCAATGAACAAATTCATCAGAAAGGCTGAGGAGGAAATTCCAAAAATACAATCCCAAGAAAGTGCTGCTTCCTCCCTTGTGAAGGAGATTACAGAGTATTTTCATGGAAACTTAGCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTTGTAAGAGACTTTCTAACAGTTCTTGACCGTGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACAATAGTTAGTTCGGCTCACAAATTCCCTGTTCCTGTTAACCCAATGCTTCCACAACCCCTTCCAGGATTACATGAGAAGCAACAGTGTAATAGCTCTTCTGATGATGACAGTCCATCACCTTAG 3036 0.4852 MQTFLWSLLLFFLSCAFQQLASSQPLFFTNTNTNTNTNRRILHEPFVPVPPSQPKKEKPKYPSSATTSITTTPATTTPTQSPFFPLYPSSPPPPSPSPITFASFPANISSLVLPHSPKPNSSNSNLLPLALSALSAAALAVLISAFVCYHRRRRRNAPHDAAAKFLRSDTELRPLRANAETAVEKHKLRHTSSASSEFLYLGTVVNSHVIEEAVEVSDSGDDRKMESPELRPLPPLTRQASLPPPPPPPPLRDETGFTTAEEDDDADEEFYSPRGSSLGGSGGTGSYSRRVFAAGRSVPSSSCPSSSSGSPERSHSMAYSPSSRRTQPENYNHQHVPSSSPSLCSTPDRVFTEHNSNEALNACARAHAHAHASSSPEKNENALSPPPRLSNAYSSSAFSLPSSPEQVTRHHTFEQSPRMSSVSDGLMLPGLSSVPLSPALLSSPETERGTFNGLGAGSYGAAAPQRKHWHIPVLSLTAPFDEIATVPVPPPVPQRKHWQNPGPAPPPPPPLPRQRKQWGGVPEPGPSTPIGQPVSRPPELVPPSRPFVLQNQATNVELLGESQETCKPKLKPLHWDKVRTTSDREMVWDQIKSSSFKLNEKMIETLFIVNTPKPKDATTNSVSHQPNQEERILDPKKSQNISILLKALNVTIEEVCEALLEGSTDSLGAELLESLLRMAPSKEEERKLKEHKDDSPTKLGLAEIFLKAVLDVPFAFKRIEAMLYIANFESEVEYLTTSFQALEAACEELQQSRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIVRTEGARLSGTSQTPSTLSEDTKCRRPGLQIVSSLSSELANVKKAAAMDSDVLSSDLLKLSNGIANIAEVVQLNNQTRGSDENSQKFTESMNKFIRKAEEEIPKIQSQESAASSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTIVSSAHKFPVPVNPMLPQPLPGLHEKQQCNSSSDDDSPSP 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01093 1011 ProSiteProfiles Formin homology-2 (FH2) domain profile. 560 983 IPR015425 -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 44 94 - -
Pste5g01093 1011 Pfam Formin Homology 2 Domain 563 957 IPR015425 -
Pste5g01093 1011 PANTHER FORMIN-RELATED 11 1005 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pste5g01093 1011 MobiDBLite consensus disorder prediction 487 515 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 487 538 - -
Pste5g01093 1011 SMART it6_source 560 972 IPR015425 -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 59 83 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 237 253 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 298 359 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 375 422 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 995 1011 - -
Pste5g01093 1011 SUPERFAMILY Formin homology 2 domain (FH2 domain) 573 968 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 215 426 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 215 229 - -
Pste5g01093 1011 MobiDBLite consensus disorder prediction 984 1011 - -
Pste5g01093 1011 Gene3D Formin, FH2 domain 560 966 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01093 Pste-Chr5 7177454 7181799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01093 534 999 FH2 protein (formin) Gene Family AT3G25500 70.270 0.0 673