Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01087 TGAATTTGTTTGGCCCATCAATTAGATCTGTAACATACATCAACATCTCTCTTCCTTTTTCATTTTCAGATCAAACGCACACAGTTACGTTCTTCAAATCAATCTCTGCTCAGAAATGGGTGCCGCACATGATGATGATGATGAGGGAACCTTGGAGATTGGAATGGAATACAGAACTGTGTCTGGAGTTGCTGGGCCATTAGTCATTCTAGACAAAGTTAAGGGACCCAAGTTTCAAGAGATTGTTAATATTCGCTTAGGGGATGGAAGTACTCGGCGTGGACAAGTGCTGGAAGTTGATGGTGAAAAGGCTGTTGTTCAGGTCTTTGAGGGCACATCTGGGATTGACAATAAATTTACAACTGTACAATTTACTGGAGAGGTGTTAAAAACTCCAGTATCAACGGACATGCTTGGCCGTATATTCAATGGTTCTGGAAAACCAATTGACAATGGTCCCCCCATATTACCTGAGGCTTACTTGGACATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAAACAGGAATATCTACCATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCTCTATTCTCAGCTGCTGGTCTCCCTCATAATGAAATTGCTGCACAGATATGCCGTCAGGCTGGTTTAGTCAAGCGACTAGAAAAGTCTGATAATCTTCTTGAGGGTGGAGATGAGGACAATTTTGCCATCGTGTTTGCAGCTATGGGAGTTAATATGGAGACTGCACAGTTTTTCAAACGTGATTTTGAGGAGAATGGCTCAATGGAGAGAGTGACCCTTTTCCTTAATCTGGCAAATGATCCTACAATTGAGCGTATCATCACTCCTCGTATTGCTCTCACTACTGCTGAATATTTGGCGTATGAATGTGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTACCTGGTAGACGTGGGTATCCTGGCTACATGTATACAGATCTTGCAACAATATACGAACGTGCTGGAAGAATTGAGGGGCGAAAAGGCTCTATTACACAAATTCCAATTCTAACCATGCCCAATGATGATATTACGCATCCAACTCCTGATCTTACAGGATATATTACTGAGGGACAGATATATATTGAGAGGCAGTTGTATAACAGGCAGATATATCCACCAATCAATGTCCTTCCATCATTGTCTCGTTTGATGAAGAGTGCCATTGGGGAGGGAATGACACGACGGGATCATGCTGATGTGTCCAACCAGCTCTATGCAAATTATGCCATTGGAAAAGATGTCCAGGCAATGAAGGCTGTTGTTGGAGAAGAAGCACTTTCGTCTGAGGATCTGCTGTATTTGGAATTTTTGGAAAAGTTTGAGAGGAAGTTTGTTGCGCAAGGAGCTTATGATACACGCAATATCTTCCAGTCACTAGATCTTGCATGGACTCTGCTTCGGATCTTTCCTCGTGAGCTTCTTCATCGTATTCCTGCAAAGACTCTTGATCTGTACTACAGCCGAGATGCCGGTAACTGATCATATATAGCAAGGTTGTATACCTTAGATCACATGCTCAATCATCTTGTAATGACCATGGCAATTGTTTTATTTCTTAGCTTTTTCTCATACAGCAATCTTTATTTCTTATATCCAGCATATTCATTATATATAATAAAAGGTTTGAGTCTGTTTGACTGCCTCATATTTTGTTTGGAATGGCGTTTAACTGCACTGTTCAGTGCTGTTAAGGAATTCTTATTTCCC 1804 0.4152 MGAAHDDDDEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSTDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGDEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIERQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLEKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDLYYSRDAGN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01087 486 FunFam V-type proton ATPase subunit B, brain 27 486 - -
Pste5g01087 486 CDD V_A-ATPase_B 90 383 - -
Pste5g01087 486 CDD ATP-synt_V_A-type_beta_C 385 479 - -
Pste5g01087 486 Hamap V-type ATP synthase beta chain [atpB]. 16 484 IPR022879 -
Pste5g01087 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 381 IPR027417 -
Pste5g01087 486 NCBIfam V-type ATPase subunit B 18 484 IPR005723 GO:0033180|GO:0046961|GO:1902600
Pste5g01087 486 Gene3D - 27 485 - -
Pste5g01087 486 Pfam ATP synthase alpha/beta family, beta-barrel domain 22 88 IPR004100 GO:0046034|GO:1902600
Pste5g01087 486 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 145 375 IPR000194 GO:0005524
Pste5g01087 486 CDD ATP-synt_V_A-type_beta_N 18 89 - -
Pste5g01087 486 ProSitePatterns ATP synthase alpha and beta subunits signature. 366 375 IPR020003 GO:0005524
Pste5g01087 486 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 8 483 IPR022879 -
Pste5g01087 486 PIRSF V-ATPsynth_beta/V-ATPase_B 10 486 IPR022879 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01087 Pste-Chr5 7136565 7142698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01087 1 486 Primary Pumps ATPases(2) AT4G38510 95.277 0.0 950