Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01075 ATGGCCTCCCCACCGACTCCAACCCTCCCTCAGCCCTCCCTTCCCTCCCTCCCCCTCCACCTCCTCCGCCGCCTCCCTCCTCCTGCTGGACCCCGAGAAACCGCCGCCCTCATCGACGCCTACCGCGACAAATGGTACTCCCTTGGCCGCACCAACCTCAAAGCCACCCACTGGCAGGAGGTCGCCGACGCCGTCACCGCTCGTTGCCCCAACGCCTCCCCCACTGCCAAAACCGCCGTCCAGTGCCGCCACAAAATGGAAAAACTCCGTAAACGGTACCGCACCGAAATCCAACGGCTCCGCTCCCTCCCCCTCCCACGCCTCAACAACGCTGCCCTCCTCCTGGGGTCTGGATCGGGGTTCCGGATCCGGATCCCGGCCCACTCGGCCTCCAAGTTTTATAACGGCCCTCCCCCGCGTGGCGTGAAGAGGGATCGGCAGAGCGATGCGGTGACCGAGATGGTGGGCGCCATTAAGGTCCTTCGCGACGGCTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATCGAGAGCATGCGTATGGAGATGGAGATGAAGCGCACCGAGATGATCCTCGACTCCCAGCACAGGATCGTCGAGGCCTTTGCTAGGGCCGTTTCTCACAAGCCACCCTCCCCCTCTTCCCAACCCTAG 663 0.6395 MASPPTPTLPQPSLPSLPLHLLRRLPPPAGPRETAALIDAYRDKWYSLGRTNLKATHWQEVADAVTARCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRSLPLPRLNNAALLLGSGSGFRIRIPAHSASKFYNGPPPRGVKRDRQSDAVTEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQHRIVEAFARAVSHKPPSPSSQP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01075 220 Coils Coil 83 103 - -
Pste5g01075 220 FunFam Trihelix transcription factor ASIL2 30 95 - -
Pste5g01075 220 Gene3D - 30 95 - -
Pste5g01075 220 Coils Coil 172 192 - -
Pste5g01075 220 Pfam Myb/SANT-like DNA-binding domain 32 99 IPR044822 -
Pste5g01075 220 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 144 208 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01075 Pste-Chr5 7081898 7082753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01075 26 100 Trihelix Transcription Factor Family AT3G14180 36.585 1.12e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste5g01075 Myb_DNA-bind_4 4.3e-14 CL0123