Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01066 AAAAATACTTGGCAGGCAAAGGAGAAAGAAAAGCGGAATGGACGTGGGTGTAAATACCAAAAATGAAGGCCCTTTAACAAAAAAAGAAGCTTTTTGCAAGCAGGATAAAGCCTCCCGCACTCCTTGTGCTGAGTGGGAAGCTAGCTAACTACCAAGTCCCAAGTCAATCCAATTAATTAACAAAACCCTCCAACTCGTTCTCCTAACTCCACCGCCACTCGCCCGAGTCCATACTCCAACTCGCTCTCTCTCCCATGGCCAATAACCCTTCCGACGCTCCCGGCGACGACTTCCTCGAACAAATCCTCAGCATCTCCACCTTCGCTTCCGCCGACTCCGGTCTGGCCGCTGCCGATGTCGGCCTGGCCAGTACGGCTTCTCCCGCTCCCATGATGCTGCAGCTCAACTCCGCCGATGCCAACCCTCACCTCGCCGCCGCCGCCGCCTTCCACCCGCCCGTCTATCAGTTAGGGTTGAGCTTGGACCAGGGCAAAGCAAGTTTCATGAAGCCCGAGGAAGCTTCCGCTAGCGGAAAGCGCTTTCGCGACGACGTCGTTGATGCCAGAGCTAAGAATGTTTTTCATGGGCAACCCATGCCTACTACTATGCCTGCTGCTCCACATCCTCCAGCAATGCGTCCTAGGGTGCGGGCCAGACGAGGACAGGCTACAGATCCACACAGCATAGCTGAACGGTTACGCAGAGAACGAATAGCAGAAAGAATCAGGGCATTGCAAGAATTGGTTCCAAGTGTCAACAAGACAGATAGAGCAGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGGGGAGCCGGTGCAGTGGCACCACTGGTAACTGACATCCCGTTATCATCAGTTGAGGAAGAAGGTGGTGAAGGTGCTAGAAACCGGCCAGCTTGGGACAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAACGTTGGGGCTGCCATGCAGTTTCTTCAATCAAAGGCTTTGTGCATCATGCCCATCTCTCTGGCATCGGCGATATACCAGTCACAACCACCGGATACTTCTAGCATAGTCAAGCCTGAAACTAATCCACCTTCGTAGACGTAAGGTTCATGCTGCACAATCTAATTATTGGTCCCATCACGGGCTCACTTAATACTGCTGGGACCCACGCCAAACGCGTTATTTGTCTGTTATCCAAACCCCCATAAATAAGTCATTGGCAAGCATCAGGTTGCAATCAAAGTCAGATGCCATAATTCTTTCTTTTTGCCTTTCTTTCAGCTTTTGTCAATACAGGGTTGGATGTCAATGCCTTGGAAAATACAAGCAGACCCCTATCTTGTCTTGCCGAATTTCAAGTAGGGAAGAAGAAATTGTCAAAAGTTAAATTGATATGCGCTTCTTTTTTTATGTCAACAATGGGTGGGGGTAGTGGACCATGATGTAAGCGCTTTTATAGTGGGGCTTAGTTTTTGTAGTGGGCTGTGGGACCTTCTAAAAGGTTAGAGTGGTGTGTATACTTTTAATAGTGAAGCTGAAATGGACTATAGTTGCTTTAACAATGACTAGGCGTTGCCCAGTCCTGCAAAAAATGATGGTGCTTTTTGTTTGTTTAGGGCGTGCGTGAGTTGTTTACCCAGAAGTAATTGGACGACTTTTCCCTATTCTTCTGAATCATTATTACATTTTGATTCATCGGAAGGACAATTTTGTGTGGGTGCTCCTTTCACCCAATCCTTGTCCATCAGTATTCAGTAAGCTCTAACCGTATTCAACTCAAGTGACAGCAAGTCTTCTCTCAGTCAACTTATCTTTGTACGGT 1860 0.4763 MANNPSDAPGDDFLEQILSISTFASADSGLAAADVGLASTASPAPMMLQLNSADANPHLAAAAAFHPPVYQLGLSLDQGKASFMKPEEASASGKRFRDDVVDARAKNVFHGQPMPTTMPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01066 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Pste5g01066 293 Pfam Helix-loop-helix DNA-binding domain 142 186 IPR011598 GO:0046983
Pste5g01066 293 FunFam Basic helix-loop-helix transcription factor 132 194 - -
Pste5g01066 293 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 88 272 - -
Pste5g01066 293 MobiDBLite consensus disorder prediction 110 141 - -
Pste5g01066 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 196 IPR036638 GO:0046983
Pste5g01066 293 Gene3D - 132 194 IPR036638 GO:0046983
Pste5g01066 293 SMART finulus 143 192 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01066 Pste-Chr5 7017894 7022398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01066 65 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.000 1.09e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste5g01066 HLH 1.1e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01066 5 7017894 7022398 Pste5g01066 5 7017894 7022398 ECH