Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01062 GTGTCTGGAAAAACAAAGAGAGAAATAGCTGAATACTAAGGAAAGGGTTCAAAACAGACAGAAAAAAGGAGAAGAAACCAATCAGGCCATCCTCTCACTCTGCATCTTTTTCAATTTCATTTTCACTTATTTCGATTTCTAGGTACCAAAAACCTGTTTCTACTTGCGCTGGATTTAATTTTCTCTTCGTTTATAGAATACATTGTATTTTTGGTTAGGATGAGTTTGTGAAAATGCCAGTGTTGATATTGTTTGCTTCGTTGCTTTAATATTTATCTAATGGGTTATGGTTTTTATAAAAAGCTTTGAGATTGTTCATGGTTTTCTGGAATGTTCTATGAATTTGTCAACCCAATGGCTAGTTTAGTGCTGTAAATGTTGTGTTGTGCACGTTGATGGGTTGGGTTTGGGCATTTTTTGTTTTCCATGGAGATTCATTTTTCCAATATCCGTAATGTTGTGTTCAATTGGAAACCCTTATTCTTAATTTCTTGTAAATTTCAGTAACTCTCATTTTTATGGCTCTTGCCCTGAAGTCAAGTTGCTTCTTGCAATTGAAGAAGCCCGAGGGCGGCTTCCAAGTTTGTTTTTCCTCCAAGAGGGCTATAATCTCTGTGAAAAGATACACTCCAGTGGCTGCTATCAGGACCATGGAATCAGCGGGACTCTCTGCAACATTCAAGAGACTGAAGGAGCAAGGAAGAGTGGCTTTCATCCCATATATCACTGCTGGTGATCCCGACCTTTCAACCACAGCTGAAGCACTGAAAGTGCTTGATTCATGTGGGTCTGACATAATTGAGCTAGGTGTTCCATACTCTGATCCTTTGGCAGATGGTCCTGTTATCCAGGCTGCTGCCACAAGATCTTTAGAAAAGGGGACCAATTTTAATGCAATTATTTCTATGTTGAAGGAGGTTGTTCCACAATTGTCATGTCCAATTGCACTGTTTACATATTACAATCCAATACTGAAGCGTGGTACTGATAGGTTTATGTCCACCATAAGAGACACTGGTGTACATGGACTTGTAGTCCCAGATGTGCCTCTGGAAGAGACAGAATCTTTAAGGACAGAAGCTAAGAAAAATGGAATTGAACTGGTACTCCTCACAACACCCACCACTCCAACAGATCGAATGAAAGCCATTGTTGATGCAGCAGAAGGATTTGTGTATCTTGTGAGCTCAGTGGGGGTCACTGGAGCTCGATCATCGATTAGTGGTTCTGTTCAGTCTCTTCTGCAAGACATTAAAAAGGCGACAACCAAACCTGTGGCAGTTGGTTTTGGAATATCAAAACCTGAGCATGTTAAACAGGTAGCAGGATGGGGAGCTGATGGTGTTATTGTTGGCAGTGCTATGGTGAAGCTGCTCGGTGAAGCCAAATCTCCTCAAGAGGGACTCAAAGAATTGGAAATTTTCACCCTCTCCTTGAAGGAGGCACTTCCTTGAAAATAAACCTTAAGAGCTCCAACTTTTGTCCTCGTCATTGATGTTGAATTAAATAAGAGTATGTGGTTCAATTTTATTTATTTCTTTCTGTTCATGGTATAGTAGTTTTAACAAATTTTGTTTCGGTTTAATTATGATATTGTGCTGTGCCTAGCGAGTCGCCTAATCATTTCATCGCTCAGACCCCCACCAATCACTGATAAGTATGATGCTGCCGAAATGTTAGTAACAC 1686 0.4021 MALALKSSCFLQLKKPEGGFQVCFSSKRAIISVKRYTPVAAIRTMESAGLSATFKRLKEQGRVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLEKGTNFNAIISMLKEVVPQLSCPIALFTYYNPILKRGTDRFMSTIRDTGVHGLVVPDVPLEETESLRTEAKKNGIELVLLTTPTTPTDRMKAIVDAAEGFVYLVSSVGVTGARSSISGSVQSLLQDIKKATTKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKLLGEAKSPQEGLKELEIFTLSLKEALP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01062 311 Hamap Tryptophan synthase alpha chain [trpA]. 60 309 IPR002028 GO:0004834|GO:0006568
Pste5g01062 311 NCBIfam tryptophan synthase subunit alpha 54 307 IPR002028 GO:0004834|GO:0006568
Pste5g01062 311 SUPERFAMILY Ribulose-phoshate binding barrel 50 290 IPR011060 -
Pste5g01062 311 ProSitePatterns Tryptophan synthase alpha chain signature. 94 107 IPR018204 GO:0004834
Pste5g01062 311 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 44 310 IPR002028 GO:0004834|GO:0006568
Pste5g01062 311 CDD Tryptophan_synthase_alpha 64 307 IPR002028 GO:0004834|GO:0006568
Pste5g01062 311 FunFam Tryptophan synthase alpha chain, chloroplastic 48 311 - -
Pste5g01062 311 Pfam Tryptophan synthase alpha chain 54 309 IPR002028 GO:0004834|GO:0006568
Pste5g01062 311 Gene3D Aldolase class I 48 311 IPR013785 -