Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01061 TGAAAATAGTGACAGGAAAAAAGATAGATTGGTGGGAAATAACGTGTCGTTATTTTTTGCGGTGGAAGCAATCCTTTTGTATCTGTTTCAACGCGCGTTCTTCATTCCCCAAACGTAGAAAAGAAGAAAAGAGACCCCTTTTGATTTTTTCTGCAATGGGTCGTCGCCATAACGACTCAGATGTTGGTAAATGCGCTCTTGTCGTCTTCTTCTTGATAGGCACAATCTCCTGTTCCTCGGTGTATCTTTTCCTTACCGTGGTCTTCAGGCCGAGCGTTGAACCTCTGCCTTCGGTGGAGGGTCGAAAAGAGGAGCAATGTTGCAGAGGGTTTGAGCATTTGGAGCTTTGGGGTGATGCTGTCAAATGGGGTTCTGAATTTAGGTTGAATTCCTCTGAGGAATGTTGCATGGCGTGTAAGAGAATGTGTCGGGGTGATGGAGGGCCTTGTTTGTGTAATTCATGGGTCTATTGTGGGGATAGAGAGGCTTGTGGACCTAGATTTCGTGAGTGTTGGTTAAAAAGACAAAAGGATGCTTTAAATCCTGATCGTCGAGACTCAGGAGATCTAGTTATGTGGACTTCTGGGTTTGTCTTTGATAAGGAGGAGGGAATTGTTGGTATGGAAACTGACCATGGAATTCTTCGAATAAAACTTTTGCCTGAATGTGCTCCTCGTTCTGTTTCCTACATTCTTGAGCTGTTGGCATTGCCTCATTGTGTTGGTTGCCAGATTCATCGTGCTGAAAGTCGAGGAAGCTTTTGGGATTCAGAAGGAAACCACATAAAAAAGACTCCATACGGTCCTCCTTTTGCACTTATTCAAGGAACATTGGAATCATATGGGACTATATTCAAGGATATTCCAAAAGAGCACTGTCCTACAATAAATAGAGGATCTGTTGCATGGGTTGGTTCTGGTCCAGAATTCTTCATCAGCCTCGCTGATCACAAGGAATGGAGAAATGCATACACTGTGTTTGGTTCTGTTCTATCTGAAGATATGGAGATTTTGGAGAAAATTGCGCAGCTTCCAACTAAATCAGAAATTTGGAATAACATTAAAGTCTCTATCTTGGAGAACCCAGTTTCGTTACGGTTTCGGAGGATGAACATAAAGTCTTGAATCCTCAGTTTCATTCATTTGTTTTCTCAATTTTTTCGTCCTTTGTTAAGTGATGATGATTTCAATCTATCAAAGGCAATACAGGAATGGATCTTGGGCTGGAGTTGCTTAACGTTAGGTATTCAGGCACCAAATTGTAGCTGATTGCAGATCAAATACAGTTGAGTACACTACAAGTTTGATAGGTATGAGCTGTGGATATTTGATGATTCTATTATTTGATTTTTCTTTGTACAGAACTTAAATTAGTGTGAAAGAAAGGGCATCACCATTCTCATATTCCTGGAAACCGAAGGCTTAGAGGAGATGAGATTAGGCACCAAATTGATGACATTCATTTGCAACTTGCACGTGTTATGTGCTACAAAATTAGTGGACATTTTCTTGATCTACTATCATGATGTAGATAAGTTGGAGATATAGAATAGCATAATTTTTGAGAAAAAGCTAAGGTTGCAGTTTTTAAAAGCTTAACAAAACATGT 1608 0.403 MGRRHNDSDVGKCALVVFFLIGTISCSSVYLFLTVVFRPSVEPLPSVEGRKEEQCCRGFEHLELWGDAVKWGSEFRLNSSEECCMACKRMCRGDGGPCLCNSWVYCGDREACGPRFRECWLKRQKDALNPDRRDSGDLVMWTSGFVFDKEEGIVGMETDHGILRIKLLPECAPRSVSYILELLALPHCVGCQIHRAESRGSFWDSEGNHIKKTPYGPPFALIQGTLESYGTIFKDIPKEHCPTINRGSVAWVGSGPEFFISLADHKEWRNAYTVFGSVLSEDMEILEKIAQLPTKSEIWNNIKVSILENPVSLRFRRMNIKS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01061 322 Gene3D - 148 311 IPR029000 -
Pste5g01061 322 FunFam Predicted protein 149 312 - -
Pste5g01061 322 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 154 304 IPR002130 GO:0000413|GO:0003755
Pste5g01061 322 SUPERFAMILY Cyclophilin-like 140 302 IPR029000 -
Pste5g01061 322 Gene3D Hepatocyte Growth Factor 59 147 - -
Pste5g01061 322 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pste5g01061 322 PANTHER EXPRESSED PROTEIN 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01061 Pste-Chr5 6993012 6997655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01061 149 312 U-box Gene Family AT5G67530 26.437 8.16e-06 45.4