Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01058 ACAAAATCCAAGCACAGTAGGAACACCGGCACCTGGTAGTTGGCACTGCAAGCAAACTCCATCCATCACTTGATTCCGACTGAAAACAAAACCCTAGAATGGAATCGCACGGCGGAGGACCCCTCCGTTCCCGTAGTTCCCAGTCCCCTTCTCCTTCCCACTCCGCCTCTGCCTCCGCCACCTCCTCCATCCACAAGCGCAAGCTCGCGTCTGAGGACCACGCGCCTCCCTTCCCTCCCTCCTCCTTCTCCGCCGACACACGCGACGGCGCCCTCACCTCCAATGATGACCTCGAGAGCATCTCTGCCCGCGGCGCTGACTCCGACTCCGACGATGACTCTGAGGACGCCGTCGTCGACGACGACGAGGACGACTATGACAACGACAATGACTCTTCCATGCGAACCTTCACTGCTTCCAGACTCAGCAACCCTCCCTCCGCCCCTCGTAACTCCAAGCTCAAGACCGAAAATTCTGCGGTTAAAATTGAGAACTCTGACAGTGTCAAAGACACTGGAAACGCCGCCACAGGTGCCGCTGCCGCCGTGGGATCTGTCCCTGGGATTGTAGTTAAGGAGGATCCAACTAAGATATTTACTGATAATTTGCAAACGAGTGGGGCTTACACAGCCAGGGAAGAGAGTCTCAAGAAAGAGGAGGAAGCAGGAAGGCTCAAATTTGTATGCCTTTCAAATGATGGTGTTGATGAGCATATGGTTTGGTTGATTGGATTGAAGAATATATTTGCTAGGCAACTTCCCAATATGCCGAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCACAAGTCTGTAATGGTTATAAGGCGTAATCACGTTGTTGGAGGAATTACATATCGCCCATATGCTAGCCAGAAGTTTGGGGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAACAATATGCACGGGATGTGGATGGACTGACACATTTTCTCACATACGCTGACAATAATGCTGTTGGCTATTTTATCAAGCAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATAGATGGCAAGGTTACATAAAGGATTATGATGGAGGAATTCTTATGGAATGCAAGATAGATCCAATTCTTCCTTACACTGATTTGTCAACTATGATCCGTCGTCAGAGGCAGGCCATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCACATTGTTTATACTGGAATTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAAATTATTGATGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAATGGGGTCATTCACGATTCAGAAGTTTAAATGTTTCTACTGACAATGCTACTAATCAAAAACATTTGTCTGGCTTTATGCGTTCACTTCTGAAGGCAAGTTGCTTAGATTCAATGAACGATCATGCTGATGTCTGGCCATTCAAGGAACCAGTTGATGCACGGGATGTTCCTGATTATTATGACATCATTAAAGATCCAATGGATTTGAAGACAATGTCTAAGAGGGTGGATTCAGAGCAATATTATGTAACATTTGAGATGTTTGTTGCGGATGTCAGAAGAATGTTTGCAAATGCACGTACCTATAATTCTCCAGAAACCATTTATTATAAATGTGCTACAAGGCATGTGCTCGTTAGAAGCCCATTTTCAAAGCAAAGTGCAAGCTGGACTCCAGTCTGGTTCCAAAATTCAGTAGGGGCACTTAAATAGTGAAGAAGATGCTACTATTCATGTATATAGATTTTTTTTCCCATGGTTACGTCACTAATTCATTATTTCATGGTTGTAGTAGTTACTTTAGCCAATGCAAGCGTAGCCGCATGGATTGCGTTATACCATTCGCTGTACGTCTTGTGGTTGGCCAAATAGTCAGCTGATTCATATCATATCAAAATTCATTCGTGGGATAAAACTAAGTGAGAAGCTGGTTGTTGTTCTTTTGAGAAAAAAAAGGTTGGTTGTTAATAGTCACTCAAACTGTAATTTTCATTTTTCTTGTAGATTAAACTTGCATTCAGTTTCATATGAATTTCATCTTAG 2093 0.4391 MESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKLASEDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEDDYDNDNDSSMRTFTASRLSNPPSAPRNSKLKTENSAVKIENSDSVKDTGNAATGAAAAVGSVPGIVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPILPYTDLSTMIRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRSLNVSTDNATNQKHLSGFMRSLLKASCLDSMNDHADVWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVDSEQYYVTFEMFVADVRRMFANARTYNSPETIYYKCATRHVLVRSPFSKQSASWTPVWFQNSVGALK 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01058 554 Gene3D - 413 539 IPR036427 GO:0005515
Pste5g01058 554 ProSiteProfiles Bromodomain profile. 450 521 IPR001487 GO:0005515
Pste5g01058 554 SUPERFAMILY Bromodomain 444 526 IPR036427 GO:0005515
Pste5g01058 554 Gene3D - 188 352 - -
Pste5g01058 554 PRINTS Bromodomain signature 502 521 IPR001487 GO:0005515
Pste5g01058 554 PRINTS Bromodomain signature 453 466 IPR001487 GO:0005515
Pste5g01058 554 PRINTS Bromodomain signature 467 483 IPR001487 GO:0005515
Pste5g01058 554 MobiDBLite consensus disorder prediction 99 134 - -
Pste5g01058 554 ProSitePatterns Bromodomain signature. 455 513 IPR018359 -
Pste5g01058 554 PANTHER GH11602P 79 526 IPR037800 GO:0004402
Pste5g01058 554 MobiDBLite consensus disorder prediction 76 96 - -
Pste5g01058 554 FunFam Histone acetyltransferase KAT2A 189 353 - -
Pste5g01058 554 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 200 351 IPR016181 -
Pste5g01058 554 Pfam Bromodomain 447 525 IPR001487 GO:0005515
Pste5g01058 554 MobiDBLite consensus disorder prediction 53 68 - -
Pste5g01058 554 CDD NAT_SF 239 293 - -
Pste5g01058 554 MobiDBLite consensus disorder prediction 8 32 - -
Pste5g01058 554 MobiDBLite consensus disorder prediction 1 134 - -
Pste5g01058 554 SMART bromo_6 426 539 IPR001487 GO:0005515
Pste5g01058 554 CDD Bromo_gcn5_like 446 526 - -
Pste5g01058 554 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 192 346 IPR000182 GO:0016747
Pste5g01058 554 Pfam Acetyltransferase (GNAT) family 239 317 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01058 Pste-Chr5 6982059 6991669 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pste5g01058 Bromodomain 2.9e-20 No_clan