Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01053 ATGGAAGGAGAGAGAGCTGGTGCGCCCAATTATGAGCTTCAAGTTTCGTTTACCAACACCCCAGAAGCCATACACGAATTGGGTTTTGTTCAATATGAAGAGAACCAGGTCCTTGGCTTCTTGTCACCTTCTTCACAATCTCAATCTTCTCATCTCTCTCAATCCTTAAACAGTGATACCGTTCAAGCTGCCACCACCACAACTGCAGCCGCAACCATCGGATTCATGAGCCATTCCGAATTTGTCACCAAAACTTGGAATAATAACGATCAGGTAGGAACTCTGGATCAAAAGGCTGTGGCTGAAGAAAATTGCACTGGAAATGCTGGTGAAGGCAACAACAACGCTTGGTGGAGGAACGCAGCTACAGAGAAGAGCAAGGTGAAAATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTACTTGATGATGGTTACAAATGGAGGAAATATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTACCGCTGCACACACAACAACTGTAGGGTGAAGAAGAGGGTTGAACGACTATCAGAGGATTGTCGTATGGTGATAACAACCTACGAAGGTAGACACAATCACTCCCCTTGCGACGATTCAAATTCATCCGACCATGAATGCTTTACCTCCTTCTAG 675 0.4415 MEGERAGAPNYELQVSFTNTPEAIHELGFVQYEENQVLGFLSPSSQSQSSHLSQSLNSDTVQAATTTTAAATIGFMSHSEFVTKTWNNNDQVGTLDQKAVAEENCTGNAGEGNNNAWWRNAATEKSKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSDHECFTSF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01053 224 Pfam WRKY DNA -binding domain 151 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01053 224 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 211 IPR044810 GO:0003700
Pste5g01053 224 ProSiteProfiles WRKY domain profile. 145 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01053 224 FunFam WRKY transcription factor 57 136 210 - -
Pste5g01053 224 SMART WRKY_cls 150 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g01053 224 Gene3D WRKY domain 136 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g01053 224 SUPERFAMILY WRKY DNA-binding domain 142 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01053 Pste-Chr5 6957601 6965831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01053 3 224 WRKY Transcription Factor Family AT2G44745 55.895 5.64e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g01053 WRKY 1.6e-24 CL0274