Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01045 CAGAGGGTCTCGAGCTTATATATACCCTGTGTTAGCCACTAGCTTTCACAGACTGAGACACACAGAAAATGGCTTCCATTTCGATGTGGACTTTGTCCGTGATTTTAGCATCACTGACCTTTACAGCACTCTGTGCCAACCCACGTAGTCCAGTGGATGTGGAATTTGGCCGAAACTACGTCCCCACATGGGCCTTTGATCACATCAAATACTTCAATGGAGGTTCTGAGATTCAGCTTCATCTTGACAAGTACACTGGTACTGGCTTCCAGTCCAAGGGCTCCTACTTATTTGGTCACTTCAGCATGTTCTATGTGGACGATGTGCCAATCAGGGTGTTCAAGAACTGCAAGGACCTAGGAGTGAAATTCCCGTTTTACCAACGCATGAAGATCTACAACAGTTTGTGGAACGCTGATGACTGGGCCACAAGGGGAGGTTTGGAGAAAACAGATTGGTCGAAAGCTCCTTTCATTGCAGCGTACAAGGGGTTCCACATCGACGGGTGCGAAGCCTCGGTGAACGCCAAGTTCTGCAACACGCAGGGCAAGAGATGGTGGGACCAACCAGAGTTCCGTGACCTTGACGCAGCCCAATGGGGTAGACTCAGATGGGTGCGCCAAAAATACACCATCTACAACTACTGCACTGACAGAAAACGCTACCCTCAACTTCCCCCAGAGTGCAAAAGAGACCGTGACATTTAAATTCTCACACACTTTCTACCATTACATCACTTCTCATTTAATTTTACCACCTAATTTTATCACATTGTAATTGTCACTGCTATGTACAATTTTATATCATGTCAGTTTCTACATTATGATTATTATTTATCGTGTCACCACATTGTCCCATAAATCCTTCTAGGACCTTATACTAAGTTTTGGGCCATTTTGCACTGCTATTTATGAATGAAAACATTGGTTCAGATAAATAATAAATACACCTGTGC 955 0.444 MASISMWTLSVILASLTFTALCANPRSPVDVEFGRNYVPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMFYVDDVPIRVFKNCKDLGVKFPFYQRMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCNTQGKRWWDQPEFRDLDAAQWGRLRWVRQKYTIYNYCTDRKRYPQLPPECKRDRDI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01045 212 Pfam Glycosyl hydrolases family 16 81 132 IPR000757 GO:0004553|GO:0005975
Pste5g01045 212 Pfam Glycosyl hydrolases family 16 34 80 IPR000757 GO:0004553|GO:0005975
Pste5g01045 212 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 80 IPR013320 -
Pste5g01045 212 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 1 139 IPR000757 GO:0004553|GO:0005975
Pste5g01045 212 Gene3D - 18 80 - -
Pste5g01045 212 Gene3D - 81 212 - -
Pste5g01045 212 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 31 80 IPR044791 GO:0004553
Pste5g01045 212 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 159 206 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste5g01045 212 SUPERFAMILY Concanavalin A-like lectins/glucanases 81 210 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01045 Pste-Chr5 6912574 6914616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01045 8 80 Glycoside Hydrolase AT5G13870 67.123 5.86e-28 105