Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01044 TCAAGTTTCCCTAGTTAAAACACAACACAAAATGGGTTCTTCTTTGTGGACTTTGTGTGTAATTTTGACCTCACTAGCCTCAGCTGCACTTTCTGCAGCACCACGTAGGCCACTGGATGTTCCGTTTGGCAGAAACTACGTTCCCACTTGGGCTTTTGATCACATCAAATACTTCAATGGGGGTTCTGAGATTCAACTTCATCTTGACAAATACACTGGTACTGGCTTCCAGTCCAAAGGGTCATACTTGTTTGGTCACTTCAGCATGAACATAAAGATGGTTCCTGGCGATTCAGCTGGCACAGTCACTGCTTTTTATAACCTAAAGGGGTTGGGAGTGAAGTTCCCCTTTGACCAACCCATGAAGGTGTACAACAGTTTGTGGAACGCTGATGACTGGGCCACAAGGGGAGGTTTGGAGAAAACAGATTGGTCCAAAGCTCCTTTCGTTGCAGCCTACAAGGGGTTCCACATCGACGGGTGTGAAACCTCTGTGAATGCCAAGTTCTGTAACACACAGGGTAGGAGATGGTGGGACCAAGCAGAATATCGTGACCTTGATGCTTTTCAATGGCGAAGACTCAGATGGGTGCGCAACAAATTCACCATTTACAACTACTGCACTGACAGAACCCGCTACCCTCAACCTCCACCTGAGTGCAGAAGAAACCGTGACTATTAA 682 0.4677 MGSSLWTLCVILTSLASAALSAAPRRPLDVPFGRNYVPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMNIKMVPGDSAGTVTAFYNLKGLGVKFPFDQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAAYKGFHIDGCETSVNAKFCNTQGRRWWDQAEYRDLDAFQWRRLRWVRNKFTIYNYCTDRTRYPQPPPECRRNRDY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01044 216 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 214 IPR013320 -
Pste5g01044 216 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 1 143 IPR000757 GO:0004553|GO:0005975
Pste5g01044 216 Pfam Glycosyl hydrolases family 16 33 96 IPR000757 GO:0004553|GO:0005975
Pste5g01044 216 Pfam Glycosyl hydrolases family 16 102 136 IPR000757 GO:0004553|GO:0005975
Pste5g01044 216 Gene3D - 17 98 - -
Pste5g01044 216 Gene3D - 99 216 - -
Pste5g01044 216 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 164 210 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste5g01044 216 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 24 96 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01044 Pste-Chr5 6900487 6901842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01044 1 96 Glycoside Hydrolase AT5G13870 71.875 7.52e-44 147