Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01039 TTCCTCTCTCTCTCTCACACACACGTTCTATCTCTGTCTCGGTGCAACTAACCTCACTCAGAACTAGTGTCCAATTTGTAACCCTCATAATTTCGTAGAGTATCTTCCTCTTCTGTCATTTCACTTATAATTCTTCCACTCCTGTTGGAATCTTACTTCCCCCTCTCTAGATGCAAAATGCTGTTTCTGACGAGTATTTTGATTTAGTTTTTGTAAATTTCTCTGCCGGGAACTTGAGTCTAGTTACAAAATGAATGTATGCTTAGGGTTTAGGGTTTTGTTGCATTGCATGCGCGTTAACTGATATTGGGAAGCTTAAGTTCAGCGTATTATAATGTGGCTCTCTGTCTTAACAGGGGAGCACTCGCATGTGATGCTCTTTATAACTCGCTATTGGACCCTTGTTGCTGTGCTGATTCTTGATTGCTTTCTGCGTCTACTTTACGTCTGAAGCATCTTTTGGACAAGGTGATGGGTCTGCAAAAGAATCCTCGTGTATTTCTTGATGTCTCAATTGATGGAGATCCTGTGGAAAGAATTGTCATTCAGCTTTTTGCCAGTGTAGTTCCCAAGACAGCCGGCAATTTTCGGGCGCTTTGTACAGGTGAGAAGGGCATTGGAAAATCAACAGGGAAACCTTTGCATTATAAAGGGACTAGCTTTCATCGTATAATTAGAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGAACAGGTGGAGAAAGTATATATGGAGGGAAATTTCCAGATGAAAATTTCAAACTAACACATGATGGACCTGGCTTTCTTTCTATGGCTAATAGTGGTCCAAACACCAATGGATCTCAGTTCTTTATTACATTCAAGCACCAACCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTTGATGGAATGGAAATTTTGAAGAAAATTGAGCAGGTGGGAACATCTGATGGTAGACCTACCCAGACAGTTAAAATTATTGATTGTGGTGAAGTGTCTGAAACAAAAGTTCAGCATACTGCTGAGAAGGAGAAAGGGAAAAGGAGAAAAACAGAAAAATCTCTAACTTCTGATGATAGTTCTGACAAAAAATCAAGGGGAAAAAGGAAAAGATCTTCCAAAGACTCAAGGAGGAGAAGGAGGAGATACTCAACATCTGATAGTGATAGTGATTCCTCAGATTCAGATTCCACTTCAGATTCTGAATCCGATTCGTCGGATTCTGATTCTAGTTCCTCTAGCTATGGGAAATACCAGAAGAGGAGACATAAACGCAAGCATGGGAAGAAGAGGAAAATTGGACGAAAGCAGAGAAAGAGAAGCCAGCACAGTAGGAGTAGAAGATCAAGACATAAGTCTAGGAGGAGTTCTGAGGATTCAAGTGATACAGAAAGTGATAGCTCTAGTGCTAGTGGCAGTAGTTCTGGTGATGCGAAAGCTGATCGTCATGCCTCAGGACGTAAGACCCATGCTGAAAATAAAGCACAAAGAAATCTAGACACTGGAAAGCAATCTTCTAGCCCTCCTCGGCAAAGGCAAACTATTCCTGAACAAACAAAGGATCCCAAGGTTAGAAGAGTTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGTGCATTTGTGAATAACGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAAGCAACATGCTAATTCAGATGATTCAAATCACAATAGAGGTGCAAGTCCCGGAAGAAGTCCTACTCCTCCTACCAGGGATTCTGAGGAGCTAAACCAAGGACATGCCTTGCTGTTGTCTAGTCCTGGCCAAAAAGCATCTGAACCTGCTGCCCCCAAACATGATCAGGGCTTTTCAAAAAGCCCTTCACCCAATGGCATGCCGAAGCGTATTAAAAAAGGACGGGGCTTTACTGAACGTTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGAGCGATCCCCTCGGACATATCGTTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACATAACCTTCAGAAATTATTCTGAGCGCTCTCCACCACGACGTTTTCGAAGCCCACCAGGTGGCAGGAGTCGTCCAAGATACCAAAGCAGAAGAAGTCGGAGTAGGAGCATCTCTCGCAGTCCAGTACGTGGCCGTTTTAGAGAGCGAAGCCGGAGCCGGAGCCGGAGTCCCAGACGGAGTTTTAGTCCAGAAGACAGGCGGCGTCCTATAAGTGACAGATTAAAATCCCGACTTGGTCCAAGAAGTGATGAACGATTGGCAGACAGGGGGAGGTCAAGGTCCAATTCTAGGAGCAATGACTCTCCTCGCTCCAGATCCCCTGATGCTACACCACCAAAACGATATGACAAAAGGACTTCTGTATCTCGAAGCAGGTCTAGATCAACCTCTTCTTCCGGACAAAAGGGTTTGGTTTCTTATGGAGATGCTACTCCTGATTCTGGGGCAAGGTAGCTACATTTTGCTAAATTGCTATTACACTCTATTCTGGGGTATTTTGCGGATGTGGAGTTCTGAAACTCAGTGAATTAAGTATTGTGCATTAGCTTAAAAACGACCATTCTATTATGTTAGTTCAACAAAGGTTTAACCGTAGTTTTTTTATTTGAATTTTGTCGTTACCTAAAATTAAGAAAACATTTATAAAGCAGTAATCGTATTAACAGTTTGCTTCCCAGAGACGGGTCACTAGTTCGTTGCAGATGTATCGGTTGGGTACTGTTGTCAAAGCAAGCTTAGATGGGAACTTGCATAGTGGATGATAGTTTTATAGTGGTTTGGTGTCGTCATGAATTATGGTAATAATGGATAGATCTAATTGGTG 2842 0.4236 MGLQKNPRVFLDVSIDGDPVERIVIQLFASVVPKTAGNFRALCTGEKGIGKSTGKPLHYKGTSFHRIIRGFMAQGGDFSRGNGTGGESIYGGKFPDENFKLTHDGPGFLSMANSGPNTNGSQFFITFKHQPHLDGKHVVFGKVVDGMEILKKIEQVGTSDGRPTQTVKIIDCGEVSETKVQHTAEKEKGKRRKTEKSLTSDDSSDKKSRGKRKRSSKDSRRRRRRYSTSDSDSDSSDSDSTSDSESDSSDSDSSSSSYGKYQKRRHKRKHGKKRKIGRKQRKRSQHSRSRRSRHKSRRSSEDSSDTESDSSSASGSSSGDAKADRHASGRKTHAENKAQRNLDTGKQSSSPPRQRQTIPEQTKDPKVRRVVDKQSHEEGELSPENGAFVNNGHDTQAEFSKPAKQHANSDDSNHNRGASPGRSPTPPTRDSEELNQGHALLLSSPGQKASEPAAPKHDQGFSKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPERSPRTYRYGDRNIRRNFDRNITFRNYSERSPPRRFRSPPGGRSRPRYQSRRSRSRSISRSPVRGRFRERSRSRSRSPRRSFSPEDRRRPISDRLKSRLGPRSDERLADRGRSRSNSRSNDSPRSRSPDATPPKRYDKRTSVSRSRSRSTSSSGQKGLVSYGDATPDSGAR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01039 666 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Pste5g01039 666 CDD cyclophilin_ABH_like 7 173 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 571 614 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 359 380 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 178 209 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 260 295 - -
Pste5g01039 666 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Pste5g01039 666 MobiDBLite consensus disorder prediction 640 654 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 412 443 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 623 639 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 341 358 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 306 321 - -
Pste5g01039 666 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Pste5g01039 666 MobiDBLite consensus disorder prediction 475 518 - -
Pste5g01039 666 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Pste5g01039 666 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Pste5g01039 666 MobiDBLite consensus disorder prediction 542 556 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 323 340 - -
Pste5g01039 666 Gene3D - 2 182 IPR029000 -
Pste5g01039 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Pste5g01039 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Pste5g01039 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Pste5g01039 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Pste5g01039 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pste5g01039 666 MobiDBLite consensus disorder prediction 178 666 - -
Pste5g01039 666 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 175 - -
Pste5g01039 666 MobiDBLite consensus disorder prediction 388 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01039 Pste-Chr5 6870394 6882971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01039 25 171 U-box Gene Family AT5G67530 48.322 1.24e-33 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01039 5 6870394 6882971 Pste5g01039 5 6870394 6882971 ECH