Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01037 ATGTTGATCCTTCTTTGTGTGTTTGTAACACTCTCGTGGCCCCAAACTACAGCTGAAGATAGTGAAGCAGATGCACTGTTGAAGTGGAAAGACAGCTTTGATAACTCTAGCCAAGCTCTCTTGTCAACTTGGAGAGGTACTAGTCCATGCAAATGGGAAGGAGTTCAGTGTGACAAATCTATGTCTGTCTCCAGCATAAATCTTGCTGATTATGGACTGAAAGGTACCCTTCACACTCTCAACTTCTCCACTTTCTCTAACCTCCTCAGCCTAAATATCTATGCAAACTCCTTTTATGGGACCATTCCCCCACAACTTGGTAACATGACCAAAGTAAATGTTTTGAATTTTTCTTTAAATTCTTTCCATGGTTCCATCCCTCAAGAAATGTGGACACTCAGGAGTTTACACAGTCTTGATCTTTCCTCGTGTAAACTAAGTGGAGAGATTCCTAATTCCATAACAAACTTGTCCAACCTGACATTTCTAGATTTAGGTGGCAACAATTTTTCTAGCCGCATTCCTCCGGGGATTGGAAAGTTACACAAGTTGGAGTATCTAAGTATTGCGAGTAGTAAGCTTCTCGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTAGGCTTATTGATTTGTCAAGAAACTCTCTCTCTGGTACCATCCCTGAAACAATAGGTAACTTGGTTAATTTAAATAAACTTTACCTTTCTAATAACTCCCTACTATCTGGGTCAATCCCCTCTTCCATATGGAACATGTCTAACTTGACCTTGCTCTACCTTGATGCCAATAAACTTTCTGGATCAATCTCAGTTTCCATAGAAAACTTGGCCAATTTAGAGCAACTTGCACTTGATCACAACTACCTTTCCGGTTCCATTCCTCCCACCATTGGAAACTTGACAAAGCTTATCGAGTTGTATTTAGGCTTCAATAATCTTTCAGGATCAATTCCTCCCTCTATAGGAAATTTGATCAAATTGGATGCCCTTAGTCTTCAAGCAAACACACTTTCTGGAACAATTCCTACCACGTTTGGAAATTTGAAAATGCTAACCGTTTTGGAATTGTCCACCAACAAACTTACTGGCAGCATTCTACCAGGCTTGAATAACATTACCAACTTTTATTCCCTGTTATTAGCTAATAATGATTTCATAGGCCATTTACCACCTCAAATTTGCTCTGCTGGGTCACTTGCGTACTTCAATGCTTTTGGCAACCGTTTCACGGGTCCAGTGCCAAAAAGCTTAAAGAACTGCTCTACTATTACTAGACTCAGGCTGGAAGGAAACCAATTGGAAGGAGATATAGCACAAGACTTTGGTGTATATCCAAATTTGAAATACATTGATTTGAGTGACAATAAATTTCATGGTCGCATTGCACCAAACTGGGGGAAGTGCCACAATCTTGATACCTTCAAGATATCCAACAACAATATTTCTGGCGGTATACCAATAGAACTTGTTGAGGCAACAAAGCTAGGTGTGCTTCATCTTTCTTATAACCTCTTGAATGGAAAGCTTCCAAAGGAATTAGGGAATATGAAATCATTATTTCAACTCAAGATTAGCAATAATCAACTTTCTGGAAACATTCCAACAGAAATTGCATTACTGGAAAATCTTGAAGATTTGGATCTGGGAGATAACAAGTTGAGTGGTACAATACCAACGGATGTAGTGGAATTACCCAAGTTACGGAATTTGAATTTGAGCAAAAACAAATTTGAAGGAAGCATTCCCTCGCAGCTTAGCCAATCTTTAGAATCTCTTGATCTTAGTGCCAATTTGTTGGGTGGAGAAATACCAACTAATCTTGGAGAATTACAAGGCTTGTTCATGTTGAATCTCTCACATAATAATCTTTCTGGCACCATTCCTTCCACTTTTAGCAGAATGTTGAGTATTGTCAACATATCAGACAACCAATTAGAAGGGCCACTTCCAAATATTCCAGCTTTTCTTGATGCTCCAATTGAATCGTTGAAAAATAATAGAGGCTTGTGTGGTAATGTCACGGGTTTGGCTCCTTGTCCAACCAACCATAATGGAAAGAGCAACAAAGTCATCCTAGTGGTATTCTTTAGTTTAGGAGCTCTACTATTGCTGTTGTTTGCGGTGGGACTTTCCATGTATACATTTTATCATTGGAAGAGAAAGGGAAAAAGTCATTCTAGTTCTGAAGAAGCACAAAAGGAGGTAATCTTTTCCATGTGGAGCTATGATGGGAAAATCATGTTTGAAAATATCATTAAAGCTACAGAGAATTTTGACAACAAATATCTAATTGGAGAAGGAAGTCAAGGATATGTTTACAAGGTAGTGCTGCCTTCAGGCTTGGTTGCTGTGAAGAAACTTCATTCAGTGATAAATGAGGACATGTCGGATTTTAGTTCAAAGGCTTTTGCAAGTGAGATTCAAGCCTTGACAGAAATCAAACACCGGAACATTATAAAATTGCATGGATTTTGCTCGCATTCACAGGTCTCATTTTTGGTTTATCAGTTCATGGAAGGTGGAAGTCTGGATCAAATGCTGAACAATGACACACAAGCAATTGCATTTGATTGGGAAAAGAGGATGAATGTTGTTAAAGGTGTGGCCAATGCTTTATCATATTTGCATCATGATTGCTCACCTCCCATTGTCCATCGTGACATATCAAGTAAGAATGTCCTTCTAGATCTTGAATATGAAGCTCACGTCTCTGACTTTGGGACTGCTAAGTTTTTAAAGCCAAGTTCAGATAGTTGGACCCAATTTGCAGGCACCTTTGGGTATGCTGCTCCAGAGTTGGCCCAGACAATGGAAGTGAATGAGAAATGTGATGTTTATAGCTTTGGAGTACTTGCATTGGAAATCCTTATGGGAAAACATCCAAGCGATCTCATTTCTCAATTGATGTCACCGTCTATGATGACAATTGTTAATGATTTGCTATTAGCTGATGTTTTAGATCAACGGCTTCCTGAACCTACAAAACCATTTGACGATGAGGTGATCTTAATTGCAAGGTTAGCACTTGCTTGCTTGAGTGAAAATCCACGTTCTCGTCCAACCATGGATCAAGTATGTAAGGCATTTGGAACAGGAAAATCACCACTGGCTAACCAATTTCCTATGATCAGACTAGGACAGCTTCGATGATTAATCATTGGAATAGTCAAGTATTTTGTTTACTTTTTATTCTCGTGTATTCCACTTTCTCCTATATAATGTAAGCATACGTGCTATGTTCACTATGTATATCCATTTGAATTAGG 3272 0.3884 MLILLCVFVTLSWPQTTAEDSEADALLKWKDSFDNSSQALLSTWRGTSPCKWEGVQCDKSMSVSSINLADYGLKGTLHTLNFSTFSNLLSLNIYANSFYGTIPPQLGNMTKVNVLNFSLNSFHGSIPQEMWTLRSLHSLDLSSCKLSGEIPNSITNLSNLTFLDLGGNNFSSRIPPGIGKLHKLEYLSIASSKLLGSIPQEIGMLTNLRLIDLSRNSLSGTIPETIGNLVNLNKLYLSNNSLLSGSIPSSIWNMSNLTLLYLDANKLSGSISVSIENLANLEQLALDHNYLSGSIPPTIGNLTKLIELYLGFNNLSGSIPPSIGNLIKLDALSLQANTLSGTIPTTFGNLKMLTVLELSTNKLTGSILPGLNNITNFYSLLLANNDFIGHLPPQICSAGSLAYFNAFGNRFTGPVPKSLKNCSTITRLRLEGNQLEGDIAQDFGVYPNLKYIDLSDNKFHGRIAPNWGKCHNLDTFKISNNNISGGIPIELVEATKLGVLHLSYNLLNGKLPKELGNMKSLFQLKISNNQLSGNIPTEIALLENLEDLDLGDNKLSGTIPTDVVELPKLRNLNLSKNKFEGSIPSQLSQSLESLDLSANLLGGEIPTNLGELQGLFMLNLSHNNLSGTIPSTFSRMLSIVNISDNQLEGPLPNIPAFLDAPIESLKNNRGLCGNVTGLAPCPTNHNGKSNKVILVVFFSLGALLLLLFAVGLSMYTFYHWKRKGKSHSSSEEAQKEVIFSMWSYDGKIMFENIIKATENFDNKYLIGEGSQGYVYKVVLPSGLVAVKKLHSVINEDMSDFSSKAFASEIQALTEIKHRNIIKLHGFCSHSQVSFLVYQFMEGGSLDQMLNNDTQAIAFDWEKRMNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPSSDSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEILMGKHPSDLISQLMSPSMMTIVNDLLLADVLDQRLPEPTKPFDDEVILIARLALACLSENPRSRPTMDQVCKAFGTGKSPLANQFPMIRLGQLR 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01037 1051 SUPERFAMILY Protein kinase-like (PK-like) 740 1029 IPR011009 -
Pste5g01037 1051 Pfam Leucine rich repeat 207 267 IPR001611 GO:0005515
Pste5g01037 1051 FunFam MDIS1-interacting receptor like kinase 2 isoform A 19 174 - -
Pste5g01037 1051 FunFam MDIS1-interacting receptor like kinase 2 840 1037 - -
Pste5g01037 1051 FunFam MDIS1-interacting receptor like kinase 2 isoform A 175 272 - -
Pste5g01037 1051 SUPERFAMILY RNI-like 65 373 - -
Pste5g01037 1051 Gene3D Ribonuclease Inhibitor 173 269 IPR032675 -
Pste5g01037 1051 Gene3D Ribonuclease Inhibitor 18 172 IPR032675 -
Pste5g01037 1051 Gene3D Phosphorylase Kinase; domain 1 720 839 - -
Pste5g01037 1051 Pfam Leucine rich repeat N-terminal domain 20 58 IPR013210 -
Pste5g01037 1051 Gene3D Ribonuclease Inhibitor 367 462 IPR032675 -
Pste5g01037 1051 Gene3D Ribonuclease Inhibitor 270 366 IPR032675 -
Pste5g01037 1051 Gene3D Ribonuclease Inhibitor 561 681 IPR032675 -
Pste5g01037 1051 Gene3D Ribonuclease Inhibitor 463 560 IPR032675 -
Pste5g01037 1051 ProSiteProfiles Protein kinase domain profile. 760 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01037 1051 FunFam Leucine-rich receptor-like protein kinase family protein 273 369 - -
Pste5g01037 1051 ProSitePatterns Tyrosine protein kinases specific active-site signature. 885 897 IPR008266 GO:0004672|GO:0006468
Pste5g01037 1051 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 374 685 - -
Pste5g01037 1051 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 348 1031 - -
Pste5g01037 1051 Pfam Leucine Rich Repeat 304 326 IPR001611 GO:0005515
Pste5g01037 1051 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515
Pste5g01037 1051 SMART LRR_sd22_2 542 574 - -
Pste5g01037 1051 SMART LRR_sd22_2 302 328 - -
Pste5g01037 1051 SMART LRR_sd22_2 205 231 - -
Pste5g01037 1051 SMART LRR_sd22_2 254 280 - -
Pste5g01037 1051 SMART LRR_sd22_2 157 189 - -
Pste5g01037 1051 SMART LRR_sd22_2 350 373 - -
Pste5g01037 1051 SMART LRR_sd22_2 588 614 - -
Pste5g01037 1051 FunFam Leucine-rich repeat receptor protein kinase MSP1 722 839 - -
Pste5g01037 1051 SUPERFAMILY RNI-like 331 649 - -
Pste5g01037 1051 Gene3D Transferase(Phosphotransferase) domain 1 840 1040 - -
Pste5g01037 1051 Pfam Protein kinase domain 762 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01037 1051 SMART LRR_typ_2 302 326 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 278 301 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 566 590 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 205 228 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 612 635 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 229 254 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 542 563 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 133 156 IPR003591 -
Pste5g01037 1051 SMART LRR_typ_2 157 181 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01037 Pste-Chr5 6865300 6868790 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01037 3 933 Receptor kinase-like Gene Family AT4G08850 43.941 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g01037 Pkinase 1.4e-45 CL0016