Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01032 TCCTTGGCCTCTGCTGCCAGCACAGTTACTGTTGGTGTTGGTGATCAAGCTGCAGTTGACAACAGTGAAGCAAACGCATTGTTTAAGTGGAAACACAGCCTTGACAAGCCAAGCCAAGATCTCTTGTCATCATGGAGAGGTACTAGTCCATGCATATGGCAAGGAATTCAGTGTGACAATTCCAACTCCATCTCCACCATAAATCTTTCAAACTATGGACTGAAAGGTACACTTCTCACCCTCAACTTTACGGCTGTCCCTAACCTCCTCAGCCTAAATATATACAACAACTCCTTTTATGGCACCATTCCCCCACAAATTGGTAACATGTCCAAAGTAAATGTTTTGAATTTTTCTTTAAATCATTTTATCGGTTCCATCCCTCAACAAGTGTGGAAACTAAGGAGTTTACATGGTCTTGATCTTTCCCATTGTCAACTAAGTGGAGAAATTCCTAATTCCATCGCAAACTTGTCCAACCTGTCATATCTAGCTTTAAGTAAAAACAATTTTTCTGGCCACATTCCTCCTCAGATTGGAAATTTGAATAAGTTGAGGCATCTAAATTTTGCAGTTAATAACCTTTCCGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTGAAAATATTGATTTGTCAAAAAACTCTCTCTCTGGTACTATCCCTGATTCAATAGGTAACATGAGTAATTTAAATCTACTTCGGATTGCCAACAACTCCCTTCTATCTGGGTCAATCCCATCATCCATATGGAACATGTCTAACTTGACATTGCTGCACCTTTATGGAAATAACCTTTATGGATCCATCCCTACTTCCATAGAAAACATGGCCAATTTAGAGGAACTTGGACTTGATTTCAACCACCTTTCCGGATCCATTCCTTCTACCATTGGAAACTTGACAAAACTCACCCAATTGTATTTACGCTTTAACAATCTTTCTGGACCCATTCCTCCATCTGTAGGAAATTTGATCAATTTGGAAACACTTAGTCTCCAAGGAAACAATCTCTTCGGAACAATTCCTGCCACAATTGGAAATATGAAGAGTCTCACCGTTTTAGAATTGACCGCCAACAAACTTAATGGCAACATTCCCCAAGATTTGAGTAGCATCAACTGCTCTTACTTGTTACTAGCTGAGAATGACTTCACAGGCCATTTACCAACTCAAATTTGCTCTACCGGCTCATTAAAGGTCTTTAGTGCTCATCACAACCATTTGACAGGTCCAGTGCCGAGAAGCTTAAAAAATTGCTCTAGTATTGCTAGACTCAGGCTGGAAGGAAACCAATTGGAAGGAGATATAGCACAAGATTTTGGTGTATATCCAAATTTGCAATACATTGATTTGAGCGACAATAAGTTTTACGGCCAAATTTCACCAAACTGGGGGAAGTGCCCGAATCTTGGTACCTTGAAGATATCCAATAATAATATTTCTGGCGGTATACCAATAGAACTTGTTCAGGCAACCAACCTAGGCAAACTTCACCTTTCTTCTAACCAATTGAGTGGCAATCTTCCCAAGGAATTAGGAAATATGAAAACCTTAATTGAATTTAAGATTAGCAGCAACCATCTTTCTGGAAACATTCCAACAGAAATTGGATTAATGCAAGATCTTGAAGAGTTGGATCTTGGAGATAATCTGTTGAGTGGCATAATACCAGTAGAAGTCATGGAATTACCCAAGTTGCGGAATTTGAATTTCAGCAATAATAATATAAATGGAAGTGTTCCCTTTAAGTTTCGCCAATTTCAACCACTTGAATCTCTTGATCTTAGTGGGAATTTGTTGAGTGGAACAATACCAAGACAGCTTGGAGAGCTGAAGCAATTGCAATGGTTGAATCTCTCTCACAATAATCTTTCTGGGAGTATTCCATCCAGTTTTGGTGGCATATCAAGTTTGATTTCGGTCAACATATCGTATAACCTGTTAGAAGGTCCACTTCCAAATAATCAAGCCTTTCTTAAGGCTCCAATTGAATCATTAAAAAATAATAAAGGCTTGTGTGGTAACATAACAGGGTTGATGCTTTGCCCAACCAATCGCATTCAAAAGAGGCACAAGGGCAATCTACAGGTGCTATATATTATCTTGGGTGCTCTTGTACTAGTTTTATGTGTGGTGGGAGTTTCAATGTATATTCTTTGTCGAAAAGCGAGAAAAAAAGAAATTCAAGCCAAAGAAAAAGATCAGTCAGAAAAAGCACTGTCTGAAGAAGTGTTTTCCATCTGGAGTCATGATGGAAAAATTATGTTTGAAAATATCATTGAAGCTACCAATAATTTCAATGACAAATATCTCATTGGAGTCGGAGGGCAAGGATCTGTTTACAAGGCTGAGTTTCCTTCAGGTCAAGTTTATGCAGTGAAGAAACTTCATTTGGAAACAGATGAAGGAAAGCCCAATTTTAAAGCTTTTGAAAATGAAATTCAAACTTTGACCGAAATAAAGCACCGTAACATTATAAAGCTCTGCGGATTTTGTTGGCATTCACGATTTTCATTTTTGGTTTATAAGTTCTTGGAAGGGGGTAGCTTGGATCAATTACTATGTAATGACAAAAAAGCAGTTACATTTGACTGGGAAATGAGAGTAAATGTTGTTAAAGGTGTGGCCAATGCTCTATCCTATATGCATCATGATTGCTCACCTCCAATAATTCATCGTGACATATCTAGCAAGAATGTTCTTTTGGATTCACAACACGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGATTCTAAAGCCAGGTTCACTGAATTGGACCACGTTTGCAGGCACGTTTGGTTATGCAGCTCCAGAGCTTGCTCAAACTATGGAAGTGACTGAGAAATGTGATGTATTCAGTTTTGGAGTGCTTTCTCTAGAAATCATCATGGGGAAGCATCCAGGAGATCTCATCTCCTCATTGTTATCTTCATCTTCAGCATCAATTACTTACAAGTTGCTATTAGTTGATGTGTTAGACCAGAGACCACCTCAACCTTTAAAATCAATTGTTGGGGATGTCATTTTGGTTGCAAGCTTGGCATTTTCTTGCTTGAGTGAAAATCCATGTTCTCGCCCAACCATGGATCAAGTGTCAAAAAAGCTTATGATGGGAATATCACCTTTAGCAGAACAATTCCCTATCATTAGACTTGGACAACTCTTCTAAAATCCTGAACTACTACTACTTAAATATTTTGCTTTCTTATTTTCTTCTTTGTACACTCTTTAGTTTGTCCTTTATGGC 3258 0.384 SLASAASTVTVGVGDQAAVDNSEANALFKWKHSLDKPSQDLLSSWRGTSPCIWQGIQCDNSNSISTINLSNYGLKGTLLTLNFTAVPNLLSLNIYNNSFYGTIPPQIGNMSKVNVLNFSLNHFIGSIPQQVWKLRSLHGLDLSHCQLSGEIPNSIANLSNLSYLALSKNNFSGHIPPQIGNLNKLRHLNFAVNNLSGSIPQEIGMLTNLENIDLSKNSLSGTIPDSIGNMSNLNLLRIANNSLLSGSIPSSIWNMSNLTLLHLYGNNLYGSIPTSIENMANLEELGLDFNHLSGSIPSTIGNLTKLTQLYLRFNNLSGPIPPSVGNLINLETLSLQGNNLFGTIPATIGNMKSLTVLELTANKLNGNIPQDLSSINCSYLLLAENDFTGHLPTQICSTGSLKVFSAHHNHLTGPVPRSLKNCSSIARLRLEGNQLEGDIAQDFGVYPNLQYIDLSDNKFYGQISPNWGKCPNLGTLKISNNNISGGIPIELVQATNLGKLHLSSNQLSGNLPKELGNMKTLIEFKISSNHLSGNIPTEIGLMQDLEELDLGDNLLSGIIPVEVMELPKLRNLNFSNNNINGSVPFKFRQFQPLESLDLSGNLLSGTIPRQLGELKQLQWLNLSHNNLSGSIPSSFGGISSLISVNISYNLLEGPLPNNQAFLKAPIESLKNNKGLCGNITGLMLCPTNRIQKRHKGNLQVLYIILGALVLVLCVVGVSMYILCRKARKKEIQAKEKDQSEKALSEEVFSIWSHDGKIMFENIIEATNNFNDKYLIGVGGQGSVYKAEFPSGQVYAVKKLHLETDEGKPNFKAFENEIQTLTEIKHRNIIKLCGFCWHSRFSFLVYKFLEGGSLDQLLCNDKKAVTFDWEMRVNVVKGVANALSYMHHDCSPPIIHRDISSKNVLLDSQHEAHVSDFGTAKILKPGSLNWTTFAGTFGYAAPELAQTMEVTEKCDVFSFGVLSLEIIMGKHPGDLISSLLSSSSASITYKLLLVDVLDQRPPQPLKSIVGDVILVASLAFSCLSENPCSRPTMDQVSKKLMMGISPLAEQFPIIRLGQLF 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01032 1059 Pfam Protein kinase domain 770 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01032 1059 Pfam Leucine rich repeat 567 627 IPR001611 GO:0005515
Pste5g01032 1059 Pfam Leucine rich repeat 447 507 IPR001611 GO:0005515
Pste5g01032 1059 ProSitePatterns Tyrosine protein kinases specific active-site signature. 893 905 IPR008266 GO:0004672|GO:0006468
Pste5g01032 1059 FunFam MDIS1-interacting receptor like kinase 2 isoform A 20 174 - -
Pste5g01032 1059 SUPERFAMILY Protein kinase-like (PK-like) 755 1039 IPR011009 -
Pste5g01032 1059 FunFam Leucine-rich repeat receptor protein kinase MSP1 732 847 - -
Pste5g01032 1059 ProSiteProfiles Protein kinase domain profile. 769 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01032 1059 PANTHER LEUCINE RICH REPEAT KINASE 2 253 1041 - -
Pste5g01032 1059 SUPERFAMILY RNI-like 337 655 - -
Pste5g01032 1059 SMART LRR_typ_2 279 303 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 566 589 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 158 182 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 86 110 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 614 637 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 255 278 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 206 230 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 327 351 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 495 518 IPR003591 -
Pste5g01032 1059 SMART LRR_typ_2 134 157 IPR003591 -
Pste5g01032 1059 Gene3D Transferase(Phosphotransferase) domain 1 848 1045 - -
Pste5g01032 1059 Pfam Leucine Rich Repeat 329 350 IPR001611 GO:0005515
Pste5g01032 1059 Pfam Leucine Rich Repeat 208 229 IPR001611 GO:0005515
Pste5g01032 1059 Pfam Leucine Rich Repeat 136 158 IPR001611 GO:0005515
Pste5g01032 1059 PRINTS Leucine-rich repeat signature 209 222 - -
Pste5g01032 1059 PRINTS Leucine-rich repeat signature 614 627 - -
Pste5g01032 1059 FunFam MDIS1-interacting receptor like kinase 2 848 1045 - -
Pste5g01032 1059 Gene3D Phosphorylase Kinase; domain 1 727 847 - -
Pste5g01032 1059 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Pste5g01032 1059 SMART LRR_sd22_2 303 332 - -
Pste5g01032 1059 SMART LRR_sd22_2 351 377 - -
Pste5g01032 1059 SMART LRR_sd22_2 158 184 - -
Pste5g01032 1059 SMART LRR_sd22_2 590 616 - -
Pste5g01032 1059 SMART LRR_sd22_2 255 281 - -
Pste5g01032 1059 SMART LRR_sd22_2 206 232 - -
Pste5g01032 1059 SMART LRR_sd22_2 542 563 - -
Pste5g01032 1059 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 375 689 - -
Pste5g01032 1059 SUPERFAMILY RNI-like 67 374 - -
Pste5g01032 1059 Gene3D Ribonuclease Inhibitor 273 374 IPR032675 -
Pste5g01032 1059 Gene3D Ribonuclease Inhibitor 19 174 IPR032675 -
Pste5g01032 1059 Gene3D Ribonuclease Inhibitor 175 272 IPR032675 -
Pste5g01032 1059 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 275 372 - -
Pste5g01032 1059 Gene3D Ribonuclease Inhibitor 375 686 IPR032675 -
Pste5g01032 1059 FunFam Predicted protein 175 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01032 Pste-Chr5 6824684 6828197 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01032 23 941 Receptor kinase-like Gene Family AT4G08850 43.576 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g01032 Pkinase 7.2e-43 CL0016