Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01027 ATGTCGAATAGCCTGCATAGGAAGTACGAGGGAAGCTCATTTCTCATTGACATAACCACCACTGTTAACTACACCATCAATAAAGCCAAAAAAAGATGGCGTTTTGCTTATACAGCAATTTATTCTAGAAGGGTCATGCTTGCCCTGGCTAAAGAAGTCATATCCAAAAGAAATACAAATACCTATCCTTGTTCTAAACTCTTCCAAACTCAGTCTTCGAATTCCAGCAGCATTCTTGATATCGTTGAACCCTTAATTCCCCAATATAGAAGCAAACATTATTCTTCAATTGCTGATGTTGACAAAGCCAGACTTGCTGGCATGGTAAAGGACAAAAACTTGGAAGCCTTTACTGAGTTTGGAGGAGTTGAAGGTGTTGCAAATATTCTTGGAATCATTCCTGCTAAGGGAATCAGTGGCTGCGATGATGATGTTGCCAAACGGCGTGAACTGTTTGGTTCAAACACTTATCAGAGGCCACCACCCAAAGTATTTGTAAGCTTTGTAGTGGAGGCCTTTAATGACACTACTATTCTGATCCTTCTTGTTTGTGCTGGCCTTTCCCTTGGTTTTGGAATAAAAGAACATGGACCAGGGGAAGGATGGTATGAAGGAGGGAGTATATTCGTAGCTGTCTTTCTGGTAGTGGTTGTCACTGCACTCAGCAACTTCAGGCAAGAGAGACAATTTGACAAACTGTCTAAGATAAGCAACAACATCAAAGTAGATGTCGTGAGAAATGGAAGGCCACAGAAGATATCCATCTTTGATGTACTTGTGGGGGATATGGTGTCTCTTAAGATTGGTGATCAAATTCCAGCTGATGGCTTGTTCTTAAGTGGCCATTCTTTGCAAGTGGATGAATCAAGTATGACAGGTGAGAGCGACCACGTAGAAATTGAGCCTTCAAAGAGCCCCTTCTTGTTGTCTGGTGCAAAAGTGGTGGATGGCTATGCACAGATGCTTGTCACATCTGTGGGAACCAACACAGCATGGGGTGAAATGATGAGCTCAATATCGCAAGACACCAAGGAAAGGACACCATTACAGGCTCGCCTTGACAAGTTAACCTCTTCTATTGGAAAGGTAGGCCTCACGGTCGCTCTCCTTGTTCTCATAGTCTTGTTAATTCGTTATTTCACTGGAAACTCACAAGATGATAATGGGAATAAGGAGTTCCAGGGAAGTAAAACTGATGTAAACGACATTTTCAATGCGGTTGTGAGGATTGTCGCAGCTGCTGTAACCATTGTGGTTGTGGCAATCCCTGAGGGTCTGCCATTGGCTGTCACTCTCACACTTGCTTATTCCATGAAAAGAATGATGGCAGACCAAGCAATGGTGAGGAAACTTTCTGCTTGTGAAACAATGGGGTCTGCCACAGTTATTTGCACAGATAAAACTGGTACATTAACTTTGAATCAAATGAGAGTCACCAAGTTTTGGCTTGGCTTAGAAAATTTTATGGAGTACTTTTCCAAAGCAATGGCTCCTAATGTTCTTGAGTTATTACACCAAGGAGTTGGCCTCAACACAACTGGCAGTATCTATATACCTTCATCAGAATCTGAACCTGAAATTTCTGGCAGCCCAACAGAGAAAGCCATACTCTTGTGGGCCGCAACGGATTTAGGCATGGACATGGATGAACTGAAGCGCACACATGAAGTTCTCCATGTTGAAACATTTAACTCGGAGAAGAAACGAAGTGGCGTTGCAATAAGAAAGGAGACCAACAACACAGTTCACGTGCATTGGAAGGGTGCTGCAGAGATTATACTTTCAATGTGTTCTAATTACATTGACATTAACGGCGTACAGAAGTCCCTTGATGAAGAACGGAGTAAACTTGAGAAGATAATTCAAGGCATGGCTGCTAGTAGCCTTAGATGTATTGCTTTTGCTCACGTGCAGATTTCAGAAGATATTGATTATAACAAGGAGGAAACAAATCAAATTCTTAAAAAAGATGGCTTGACCTTACTAGGCATTGTTGGCCTCAAGGATCCATGCCGACCCGATGTGAGGAAGGCTGTGGAAACTTGTAGACGAGCAGGTGTTAGTATCAAGATGATCACTGGAGATAACATTTTCACTGCAAAGGCAATAGCAACAGAATGTGGAATATTAGACCTTGATGGCCATGCAAATGTAGGAGAAGTTGTTGAAGGTGTTGAATTCAGGAACTACACGGAGGAAGAGAGAATGGAGAAAGTTGAGAAGATTCGCGTTATGGCAAGATCATCCCCTCTAGATAAACTTTTGATGGTGCAATGCTTGAAAAAGAAAGGCCATGTTGTTGCAGTAACAGGAGATGGCACAAATGATGCACCTGCTCTAAAAGAAGCTGATGTTGGACTTTCTATGGGAATCCAAGGAACTGAAGTTGCCAAGGAGAGTTCTGACATCGTGATCTTAGATGACAACTTCAATTCTGTGGCTACTGTCTTAAGGTGGGGTAGATGTGTTTACAACAACATCCAGAAATTTATCCAGTTTCAACTAACCGTGAATGTTGCTGCTCTAGTGATCAATTTTATCGCAGCAGTTTCTTCGGGAGATGTTCCCTTAACAACAGTTCAACTATTATGGGTAAATCTCATTATGGATACGCTAGGAGCTTTGGCACTGGCTACAGAAAGGCCTACAAAAGAGTTAATGGAGAAACAGCCAGTGGGTAGAACTGAGCCTCTTATTACTATTATTATGTGGAGAAACCTTTTAGCTCAAGCTTTATATCAGATTGCTGTTCTCTTGGTTTTACAATTCAATGGACAGTCAATCTTCAATGTAAATGGGAAGGTAAAGGATACTCTAATTTTTAATGCTTTTGTTCTCTGCCAAGTTTTCAACGAGTTCAACTCTAGAAGTATGGAGAAACTTAATGTATTCGAAGGCATTCACAAAAATCATTTGTTTCTTGGAATTGTGGGGATTACTCTAGTTCTTCAAGTTCTGATGGTGGAACTCCTAAGGAAGTTTGCTGATACGGAGCGATTAACATGGGAGCAATGGGGAATTTGTATTGGGATTGCAGCTGTGTCATGGCCAATTGCTTTCTTAATAAAGCTCATCCCTGTTTCAGATAGAACGTTCTTCAGCCACATTAAGTGGGTAAAATTATTGGTATCCAAGATTAAGCATTAG 3147 0.4147 MSNSLHRKYEGSSFLIDITTTVNYTINKAKKRWRFAYTAIYSRRVMLALAKEVISKRNTNTYPCSKLFQTQSSNSSSILDIVEPLIPQYRSKHYSSIADVDKARLAGMVKDKNLEAFTEFGGVEGVANILGIIPAKGISGCDDDVAKRRELFGSNTYQRPPPKVFVSFVVEAFNDTTILILLVCAGLSLGFGIKEHGPGEGWYEGGSIFVAVFLVVVVTALSNFRQERQFDKLSKISNNIKVDVVRNGRPQKISIFDVLVGDMVSLKIGDQIPADGLFLSGHSLQVDESSMTGESDHVEIEPSKSPFLLSGAKVVDGYAQMLVTSVGTNTAWGEMMSSISQDTKERTPLQARLDKLTSSIGKVGLTVALLVLIVLLIRYFTGNSQDDNGNKEFQGSKTDVNDIFNAVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFWLGLENFMEYFSKAMAPNVLELLHQGVGLNTTGSIYIPSSESEPEISGSPTEKAILLWAATDLGMDMDELKRTHEVLHVETFNSEKKRSGVAIRKETNNTVHVHWKGAAEIILSMCSNYIDINGVQKSLDEERSKLEKIIQGMAASSLRCIAFAHVQISEDIDYNKEETNQILKKDGLTLLGIVGLKDPCRPDVRKAVETCRRAGVSIKMITGDNIFTAKAIATECGILDLDGHANVGEVVEGVEFRNYTEEERMEKVEKIRVMARSSPLDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMEKQPVGRTEPLITIIMWRNLLAQALYQIAVLLVLQFNGQSIFNVNGKVKDTLIFNAFVLCQVFNEFNSRSMEKLNVFEGIHKNHLFLGIVGITLVLQVLMVELLRKFADTERLTWEQWGICIGIAAVSWPIAFLIKLIPVSDRTFFSHIKWVKLLVSKIKH 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01027 1048 PRINTS P-type cation-transporting ATPase superfamily signature 770 789 - -
Pste5g01027 1048 PRINTS P-type cation-transporting ATPase superfamily signature 685 695 - -
Pste5g01027 1048 PRINTS P-type cation-transporting ATPase superfamily signature 287 301 - -
Pste5g01027 1048 PRINTS P-type cation-transporting ATPase superfamily signature 663 674 - -
Pste5g01027 1048 PRINTS P-type cation-transporting ATPase superfamily signature 794 806 - -
Pste5g01027 1048 PRINTS P-type cation-transporting ATPase superfamily signature 464 478 - -
Pste5g01027 1048 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 471 667 IPR023299 GO:0000166
Pste5g01027 1048 Pfam Cation transporting ATPase, C-terminus 855 1025 IPR006068 -
Pste5g01027 1048 CDD P-type_ATPase_Ca_PMCA-like 145 903 - -
Pste5g01027 1048 Gene3D - 143 340 - -
Pste5g01027 1048 ProSitePatterns E1-E2 ATPases phosphorylation site. 466 472 IPR018303 -
Pste5g01027 1048 Gene3D - 474 670 IPR023299 GO:0000166
Pste5g01027 1048 Pfam Cation transporter/ATPase, N-terminus 121 188 IPR004014 -
Pste5g01027 1048 Pfam E1-E2 ATPase 240 442 - -
Pste5g01027 1048 Gene3D - 461 815 IPR023214 -
Pste5g01027 1048 NCBIfam HAD-IC family P-type ATPase 406 485 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g01027 1048 NCBIfam HAD-IC family P-type ATPase 740 850 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g01027 1048 NCBIfam HAD-IC family P-type ATPase 208 381 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g01027 1048 SUPERFAMILY Calcium ATPase, transduction domain A 239 338 IPR008250 -
Pste5g01027 1048 FunFam Calcium-transporting ATPase 216 340 - -
Pste5g01027 1048 SFLD p-type atpase 446 823 IPR044492 -
Pste5g01027 1048 PANTHER CATION TRANSPORTING ATPASE 97 1028 - -
Pste5g01027 1048 NCBIfam calcium-translocating P-type ATPase, PMCA-type 110 1027 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pste5g01027 1048 SUPERFAMILY HAD-like 462 875 IPR036412 -
Pste5g01027 1048 PRINTS H+-transporting ATPase (proton pump) signature 770 786 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g01027 1048 PRINTS H+-transporting ATPase (proton pump) signature 617 635 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g01027 1048 PRINTS H+-transporting ATPase (proton pump) signature 802 827 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste5g01027 1048 FunFam Calcium-transporting ATPase 787 1029 - -
Pste5g01027 1048 SFLD C1.7: P-type atpase like 446 823 - -
Pste5g01027 1048 Pfam haloacid dehalogenase-like hydrolase 462 784 - -
Pste5g01027 1048 FunFam Calcium-transporting ATPase 665 815 - -
Pste5g01027 1048 Gene3D - 171 1024 - -
Pste5g01027 1048 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 1027 IPR023298 -
Pste5g01027 1048 FunFam Calcium-transporting ATPase 474 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01027 Pste-Chr5 6788373 6791519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01027 28 1037 Primary Pumps ATPases AT3G63380 69.132 0.0 1363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01027 5 6788373 6791519 Pste5g01027 5 6788373 6791519 ECH