Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01004 GTTTTCAAGTGTGGAGCAACAGTGGCCGTAATTTGTATGCTCTGTCTCCAGGGGAAGGAAAGTGAGATACTTTCCGTATCACCAAACAAAAAAGCAGAAAAAAAAAAGTTTGTTAAGTCTCAAATTTTCAATTTGATTTTCCTCTACAGATTAAATTTACAGCTGAACACTCTCCATCAATTATTTTGTTGCATTTTTTTCTGGGCTGATTTGGTGAGTTGCATTTTTCTGCTTGAGATCTTTCTTAGCCATTTAATTGTGGGGTATGCTTTGTTTATGCCGAGCTCAAGAGACTAAGCATTATTTGAATAATTAAATTAAATTTCGCTGTAGCTTTTGGTTTATTTTATTGCTGGTTGGTTGGTTGTACCAAATCCTTTAGCTTGAGAGATTGATTGTAGAGTTTGTTGGCAATGGAATGTGTCCCCAGTTTGTGAAGTTTGGATTTTTAGGTGGAAGGTTGTGGAGATCCAGGAACTGTTTCCTCTCTTATGCCCCATGAGGAGTTTGTTCCCTGCTGAATCCTGTAAAGAAGCGCACCCAAATGCTTTGAATCCTCAGTCTTGGCTCCAAATTGAGAGAGGGAAACTTCCCAAGTTGTCATCACATCCCTCATCTGCCTCAATAGAATCTCTGATCAAGGTCCCACAGCCAGCTATACTCCCTTTCTATAAGCCTGCTGATTATGTTGAAGTTTTAGCTCAAATCCATGAAGAGCTCGAGTCTTGTCCTCCGCATGAGCGGGCAAATCTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTTGGAGAACTTAAACTGATGCGTAGAAGCCTCCAGGGAGCTTGGCAGAGAGCCAACACTCTTCATGAGAAGATCATATTTGGGGCTTGGTTGAAGTATGAGAAGCAAGAAGAAGAATTAATAGCTGACTTGCTTGCAAATTGTGGTAAATGCGCAAAGGAGTTTGAGCCTGTAGATATAGAGTCTCATCTTCTATTTGATGTAAATGCAACTTCTGATGAGAGAATGACCAATGAGAACTGCTTTCCCCAAAATGTTACTTTTACCATTGGGAATGAAAAGATAGTTTGTGATAGACACAAAATTTCAGAACTTTCAGCACCATTTCATGCAATGCTAAAGGGGAATTTCAGTGAATCACTCTCTGAGAATATAGATTTGTCAGAAAACAGTATCTCTCCTTCAGGTATGAAGGCAGTAAGTGATTTCAGTTTGACAGGCAGTTTAATTGAGGTCCCTCCAAATCTTTTGTTGGAGATATTGGTTTTTGCAAATAAGTATTGTTGTGAAAGACTTAAAGATGCTTGTGATAGAAGACTTGCTTCCTTAATTTCCTCCAAAGAAGATGCAGTGGAGCTCATGGAATATGCTCTTGATGAGAATTCAACTGTTCTTGCTGCATCATGCTTACAAGTTCTTTTGCGTGATCTTCCAAACTGTTTGAATGACAATCGGGTGGTGGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGCAGTCATGGTTGGGCCTGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAATTCAGACACAACAGCTCATATCCTTGAACGGTTAGTTGAGTTTGCTGAGAATGACAAGCAGAGACTACTGGCTTTACATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAGTATGATGAAGCACACCGTCTTTTTGAAGGGGCAGTAAATGCAGGCCATATATATTCTGTAGCTGGTTTAGCTAGACTGGACTATATAAAGGGTGACAAACTTTTATCTTATGGGCAGCTCTGCTCAGTCATTTCGTCTGTTACTCCACTTGGATGGATGTATCTGGAAAGATCACTGTACTCTGAGGATGAGAGAAGATGGGAGGATCTTGAGAAAGCAAGTAATCTTGATCCTACTCTTATATATCCTTACATGTACAGGGCTGCCACTTTAATGAAGTCGCAGAATGCTCAAGCTGCACTAGCTGAAATTAATCGTATTCTTGGGTTCAAACTTTCACTAGAATGCTTGGAAATACGATTTTTTATCCATCTGGCTCGTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACAATTCTGACTTTGCGTTCAGATTATCGAATGTTTGAGGGGCGTGTCGCTGCATCCCAACTCTGTACTCTTGTGCGAGAACATGTTGAGCGTTGGACAACTGCAGATTGTTGGGCACGTTTATATGACTGTTGGTCTGCAGTTGATGATATCGGGTCTCTGTCGGTTATCTACCAAATGCTTGAATCTGATGCAGCAAAAGGTGTTCTATACTTCAGGCAGTCATTGCTTCTCCTAAGGTTGAACTGTCCTGAGGCTGCTATGCGGAGTTTGCAGTTAGCTCGGCAACATGCATCAAGTGAGCATGAACGACTTGTATACGAGGGGTGGATCTTATATGATACAGGTCATTATGAGGAAGGGCTCCGAAAAGCCGAAGAGTCTATCAGTATCAAAAGATCTTTTGAGGCCTTTTTCCTGAAGGCTTATGCATTGGCTGACTCCAGTCTTGATCCATCATGTTCATCAACTGTTATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTTATGTTGACTGTGGGAAATTGGACTTGGCTGCTGATTGTTATATCAATGCCCTTAAAATCAGACACACCCGAGCTCATCATGGTCTTGCTCGTGTTCATTGTCTCAAAAATGATAAGGCTGCTGCTTACATGGAAATGACCGAACTTATTAAGAAGGCAAAAAACAATGCATCTGCTTATGAGAAGAGGTCTGAGTACTGTGATCGTGAACAAGCAAAGGCAGATCTGGAGATGGTCACTAGATTAGATCCACTTCGGGTGTATCCTTATAGATATCGTGCTGCAGTATTGATGGACAACCACAAGGAAGAGGAAGCCATTGCAGAACTCTCTAGAGCCATTGCATTTAAAGCTGATTTGCACCTCTTACATCTACGTGCAGCTTTCCATGAACATAAAGAGGATGTCCTAGGTGCTCTAAGAGACTGTCGTGCTGCCCTCTCGGTGGACCCAAACCACCAAGAAATGTTGGAACTTCACAGTCGAGTTAATAGCCACGAGCCATGAGTCAAAAACATGATGAATTGGCTTAGATGGCATTGCAGATTATCCAAACTTGGCTGCACTGAAAAGTTACCGTCATGCCTTAAAGAATGGACATTGGACTTGTTGGAGTGACCACCATTTGATCTGCCAGCAGCTCAGTCATGAAAATCAAATTTGTAACATAGAAAAGTATAGTTAAATTATTGTCCTGTCTATAATAATGAACACGTGAATTATCACCATTTTTTTTTAGCCTCTGGGCAGTGGTCCCAATTTTGTAATTGGTAATCTTGATTTTTAGGGGGGTATATTATGAGTGTCAAATGTGTTGTTTATCTCCCTTTTGTTTTTTGATTAAAATGGTGTGCAAGGCAAATATATTTATAATATTTATTTACTCACGTAGCCTCAA 3550 0.4056 MRSLFPAESCKEAHPNALNPQSWLQIERGKLPKLSSHPSSASIESLIKVPQPAILPFYKPADYVEVLAQIHEELESCPPHERANLFLLQYQVFRGLGELKLMRRSLQGAWQRANTLHEKIIFGAWLKYEKQEEELIADLLANCGKCAKEFEPVDIESHLLFDVNATSDERMTNENCFPQNVTFTIGNEKIVCDRHKISELSAPFHAMLKGNFSESLSENIDLSENSISPSGMKAVSDFSLTGSLIEVPPNLLLEILVFANKYCCERLKDACDRRLASLISSKEDAVELMEYALDENSTVLAASCLQVLLRDLPNCLNDNRVVEIFVHANKQQLAVMVGPGIFALFCFLSEVSMNLNSNSDTTAHILERLVEFAENDKQRLLALHQLGCVRLLRKEYDEAHRLFEGAVNAGHIYSVAGLARLDYIKGDKLLSYGQLCSVISSVTPLGWMYLERSLYSEDERRWEDLEKASNLDPTLIYPYMYRAATLMKSQNAQAALAEINRILGFKLSLECLEIRFFIHLAREDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHYEEGLRKAEESISIKRSFEAFFLKAYALADSSLDPSCSSTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01004 886 PANTHER ETO1-RELATED 1 885 IPR044631 GO:0010105
Pste5g01004 886 Pfam BTB/POZ domain 179 275 IPR000210 GO:0005515
Pste5g01004 886 Coils Coil 363 383 - -
Pste5g01004 886 Coils Coil 761 781 - -
Pste5g01004 886 SUPERFAMILY TPR-like 381 738 IPR011990 GO:0005515
Pste5g01004 886 SUPERFAMILY POZ domain 176 275 IPR011333 -
Pste5g01004 886 Gene3D Tetratricopeptide repeat domain 598 781 IPR011990 GO:0005515
Pste5g01004 886 Gene3D Tetratricopeptide repeat domain 785 884 IPR011990 GO:0005515
Pste5g01004 886 SMART BTB_4 179 279 IPR000210 GO:0005515
Pste5g01004 886 Gene3D Tetratricopeptide repeat domain 353 546 IPR011990 GO:0005515
Pste5g01004 886 Gene3D Potassium Channel Kv1.1; Chain A 171 319 IPR011333 -
Pste5g01004 886 SMART tpr_5 635 668 IPR019734 GO:0005515
Pste5g01004 886 SMART tpr_5 601 634 IPR019734 GO:0005515
Pste5g01004 886 SMART tpr_5 709 742 IPR019734 GO:0005515
Pste5g01004 886 SMART tpr_5 838 871 IPR019734 GO:0005515
Pste5g01004 886 SUPERFAMILY TPR-like 692 877 IPR011990 GO:0005515
Pste5g01004 886 ProSiteProfiles TPR repeat profile. 709 742 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01004 Pste-Chr5 6625701 6640865 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste5g01004 BTB 0.0002 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01004 5 6625701 6640865 Pste4g02127 4 15550861 15554741 PCT