Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01001 CAAAGAAGGAACATGCATGGCCCCACTTTCTCTCTCTGTTCCGCTCAACAAAGTACTGCAACCTTGCCATCATTCAAATACCAAAAATCAAAAAAGAGAAAGCTAAAGCTAACCATAACTATCTCCATTCTCCAACACCACTTTAGTTCCCCCCTTCCCCTGCTACTTCTACTTCTACTTCTACTTCACACTCACACAACCTTTTGTTTTTCGCTTCTTCTCATGCCCTTCTGGTTTTACAACTTCCAAGTCAAGACTCAAGAGACACTCACAAAGGAGACAATATATCCATTCTTTTTCTTCTCCATTTCAATGGATTTTGTTAACTAGAAGGGTTTGTTTGATGATACGAGAAATTGAGATATGGAGAGGGTTGCAGAGCCAAAGGTAGTTCCTCGGTCGTTGCCTGTTCTGGTTGAGGTATCTAATGCACGAACACACACACACACGGGTGCGATAAGAGAAGGTGGTCAAAGACTAAATGGGCAAGACGTGAGTGTGCGAGGGATTCCAACAAACGAAGGAAATCAGTTTTCAAAATCACGGGATGGCTCAATCACTCGTCTGGCCTCCATAAGAGAAGTGGCTCAGTTATCAAATGCGCGAATAGTTTTGGTAAGGGAGGATATGGGATTCTGTCAAGAGCCACCCTCATCTGCGCCTACAAGATCATGGAAAGGAAAGGGCTCTTTACCACAACTTGTGCCTCATGTTGACACATTGAAGATGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCTGAACCTGTTGATACTGATCTCATGAGAACGGTTTATGTACCAATTGGTCAAACCAAATCTGAGGCTGGATGCGTAATGAATAATGTGTCCTTGAAGGGTCCTTTCTTGGAAGATCTTTCTATTTGTGTTCCCGCTAAAAAACCAATCCTAGCTGTTGTTTCTCCTTCAGAAAGCCTGCTTGAAGAATCAAATGACATGGGGAACTTGCCTTCTCCATTTTCAGGTGCCCCTGCATCACACAATACTGAGCACTCTCCCCTTGCCCCCGATTCCGACGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGCCAATGTCAGTCCTCATAGTAGTATTGATAGTGCCAGTGTTGTCAGAACAATGAGCATAGTTAATAGTTGTGCAAGTACATATCGGAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGTACTAAGGGAAGTGTAAAAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGACGACAGTAACTGGAGTAACATTACTGGTAGTGCCAATAAGCCCCATAAAGGAAATGATCCCAGGTGGAAGGCTATCCTTGCAATCCGAGCACGAGATGGAATTTTGGGTATGAGTCACTTTAGGTTACTTAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCTGAGCTGAGTGCTACTCGATGTTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAACTGACTAGGGCACAAACAGAAAGAGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACCGACAGATTCTCCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCGGAGTATGCTGCTCGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAATGTACTAGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCAGATGCGCAGTTTCACCTACCCTTATTAGAAATTTTGATGGAGACCCCTCAAAACGAGCCGGTGGTGCATTCTGTGTCCAGCCAGCTTGTATTGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCTCGGCTCTTTGCTCAGAAAAATAAGAAATCACGGAAGCCTAAAACTGAACCTGGCGTGCCATCCAACACACTTCCAGAGCTTGTTGCAGAACCAACAACAGCTCGGTCAATGTCTTTTGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCACGAGTTACTGTATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCCACACTGTTCAATGTTGTAGGTCAGCAGCTCAGATTTCCTGACTCGCCCGCCACAAGTTATGCTAGCCGCGATCTCATCCGGGGCTTGTTGGTGAAGGAACCGCAACACCGTCTTGGGGTGAAGAGAGGTGCAACTGAGATCAAACAGCACCCCTTCTTTGAAGGTGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCTGAAGTTCCAAGACCAGTTGAATATGATCTACCAGCAAAGTTTGAACCAGTAGATACTGTGGGGGTTAGCAGCAGCAGCAGCAACAACAATAATAGTAGTAAGAAGATGGCGGGTAATAATGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAGTTTGGATTCCTCAATCTACTTTGTACTGTATTTCCATCTTTGGTTAGTTTTACATGAGGTGAAAGCTACATTATCATGTTATTTCAGTTTAGTCACACTTAGCAGAATTCCATTTCAGTTGGAAAAATGATACCTCACATTCAGAGGGTAGGATTGGATCCCCTAGTCTAATACAACAATTCATATAGATAATCCATGATCTAGTGTCTCAATACAAAATCTAGATATTTCTCACTAAGCTTAATGTCATTTGCTGTTTATCCTTTAAATGTATCTATTAGAATGGC 2921 0.4355 MERVAEPKVVPRSLPVLVEVSNARTHTHTGAIREGGQRLNGQDVSVRGIPTNEGNQFSKSRDGSITRLASIREVAQLSNARIVLVREDMGFCQEPPSSAPTRSWKGKGSLPQLVPHVDTLKMETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAGCVMNNVSLKGPFLEDLSICVPAKKPILAVVSPSESLLEESNDMGNLPSPFSGAPASHNTEHSPLAPDSDEKECVWDASLPPSANVSPHSSIDSASVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVKGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRKPKTEPGVPSNTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEYDLPAKFEPVDTVGVSSSSSNNNNSSKKMAGNNDMKSGGKYLDFEFF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01001 756 SMART serkin_6 356 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01001 756 SUPERFAMILY Protein kinase-like (PK-like) 338 733 IPR011009 -
Pste5g01001 756 CDD STKc_phototropin_like 354 707 - -
Pste5g01001 756 MobiDBLite consensus disorder prediction 721 741 - -
Pste5g01001 756 MobiDBLite consensus disorder prediction 197 221 - -
Pste5g01001 756 Gene3D Phosphorylase Kinase; domain 1 354 439 - -
Pste5g01001 756 PANTHER FLIPPASE KINASE 1-RELATED 130 711 - -
Pste5g01001 756 MobiDBLite consensus disorder prediction 285 333 - -
Pste5g01001 756 Gene3D Transferase(Phosphotransferase) domain 1 440 507 - -
Pste5g01001 756 MobiDBLite consensus disorder prediction 721 747 - -
Pste5g01001 756 MobiDBLite consensus disorder prediction 285 329 - -
Pste5g01001 756 FunFam serine/threonine-protein kinase D6PK-like 583 706 - -
Pste5g01001 756 Pfam Protein kinase domain 357 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01001 756 Pfam Protein kinase domain 585 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01001 756 MobiDBLite consensus disorder prediction 197 230 - -
Pste5g01001 756 ProSiteProfiles Protein kinase domain profile. 356 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g01001 756 Gene3D Transferase(Phosphotransferase) domain 1 584 706 - -
Pste5g01001 756 FunFam Serine/threonine-protein kinase D6PK-like 354 439 - -
Pste5g01001 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Pste5g01001 756 FunFam serine/threonine-protein kinase D6PK-like 440 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01001 Pste-Chr5 6590235 6595478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01001 1 756 AGC Kinase Gene Family AT2G44830 64.025 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste5g01001 Pkinase 1.2e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00163 7 1453040 1457938 Pste5g01001 5 6590235 6595478 PCT