Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00999 ATGAACCCCCGCACGACGTCGTCCAAGCCAAAGAAAAAGCAAACGACAACGACACAAGAGGCCCACCAAACGGCATGGGGAGGGCGCTACCTCGGCGTGAGGCGCAGGCCGTGGGGGCGCTACGCGGCGGAGATTCGCGACCCTTCCACCAAAGAGCGCCACTGGCTCGGCACCTTCGACACCGCCGATGAAGCCGCACTCGCCTACGACCGAGCCGCACGTGCCATGCGAGGCTCACGTGCCCGCACCAACTTCCTCTACGCAGACACCACACCCGGTTCATCCCTCACCCCTATCATCGCTCCGGACCAGCCTCAACCCGACCCGGTTCCCACCCTCGACCCGTTCTCCCTCTTGGGTTTCCCCTCCGCCTCAAACTCTTCACTTTCCGTTCCTGCCAGCGTGGCAGATTCTCATTTTAACCCGCAAGTGTTTCTTACAAATGATGAGAATAATAATAGCGATAGTGGAAACACCATAGAGCTTCCTCCATTTCCACCTGATATCACTAGCTCCCTGGGTTATGAAAATGGATTTTATGATAACAATGATGCGTATTATTGGGAGCATTTGCATGGGTCAATGTTAAGCCAAATGCCAACACTGTCAGAGAATGTGCCTGCTGCAGGCTCTCATCAACTTTTTCATTTCGGAAGTTCCTCCTTTTTCTTCTAA 675 0.5437 MNPRTTSSKPKKKQTTTTQEAHQTAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTADEAALAYDRAARAMRGSRARTNFLYADTTPGSSLTPIIAPDQPQPDPVPTLDPFSLLGFPSASNSSLSVPASVADSHFNPQVFLTNDENNNSDSGNTIELPPFPPDITSSLGYENGFYDNNDAYYWEHLHGSMLSQMPTLSENVPAAGSHQLFHFGSSSFFF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00999 224 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Pste5g00999 224 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Pste5g00999 224 CDD AP2 29 85 IPR001471 GO:0003700|GO:0006355
Pste5g00999 224 MobiDBLite consensus disorder prediction 1 27 - -
Pste5g00999 224 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Pste5g00999 224 FunFam Ethylene-responsive transcription factor 2 29 87 - -
Pste5g00999 224 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 132 - -
Pste5g00999 224 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Pste5g00999 224 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Pste5g00999 224 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Pste5g00999 224 SUPERFAMILY DNA-binding domain 29 86 IPR016177 GO:0003677
Pste5g00999 224 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00999 Pste-Chr5 6583445 6584119 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00999 5 219 AP2-EREBP Transcription Factor Family AT5G13910 45.740 1.06e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste5g00999 AP2 8.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00999 5 6583445 6584119 Pste5g00999 5 6583445 6584119 ECH