Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00994 GATGCTAAGTGCTCATTTCTTAGAACTGCAACTGCAAATTTCTCTGTAACTTTCCCAAATTGCGTTTTCCATGTCTTGAATTCAGTTTTCACTTTTCACAACTGGGAAATTTACATGTACCATGTCCAAACCAAACATTTAATTATTCCAGATCTTGTTCTGCAAGAATCAGCTAGAGCTGTCAATTACTACCACAGAATTGTGACTTGTGGCCGTACTAGTGGCATAGCATCGTCAACTGAAATACCTTCTGGAGCTGAAAATTGGTTTTTCAATTCTTCTGTGGTAGACAGACTTCGTAAGTATGAAATTCTAGAACAGATTGGCAAAGGTGCATTTGGTTCTGCTCTGCTTGTGAAACACAAGCACGAAAAGAAAAAGTATGTTCTTAAAAAGATCCGTCTTGCTCGGCAAACTGACAGAACCCGTAGATCTGCCCACCAGGAGATGGAGCTTATATCCAAAGTTCGAAATCCATTTATTGTGGAGTATAAAGATTCCTGGGTAGAAAAGGGCTGTTTTGTATGTATCATCATTGGCTATTGTGAAGGAGGGGATATGGCTGAAGCTATAAAAAAGGCTAACGGTGTTAACTTTGCTGAAGAGAAACTTTGTAAGTGGCTGGTTCAATTGCTGATGGCTCTTGATTACTTGCATGTAAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCGAGATATACGTCTAGGTGACTTTGGTCTTGCTAAAATGTTGACATCTGACGATCTTGCTTCCTCAGTGAGTGATATTTCCAAAATATTGTTATGTTCATTATTTTCAGCATTATGTTTCCTGAATCAATTGTTTTTCGTTGTTGGGACTCCAAGTTATATGTGCCCAGAGCTTCTTGCTGATATACCTTATGGCTCTAAGTCTGATATCTGGTCTTTAGGATGTTGTATCTATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTTTTGACATACAATCATTGATTAATAAAATAAACAAGTGTATAGTAGCTCCGCTGCCAACAATGTATTCTACTGCTTTCCGAGGGCTTGTCAAAAGTATGCTGCGAAAAAATCCAGAGCTGAGGCCAACTGCTGCAGAATTGCTAAATCATCCGCATCTTCAGCCTTACATTCATAAAATTCACCTAAAATTAAATAGCCCCACAAGAACCACTTTCCCATTCCAATGGCCCGAGTCAAATTATCTGAGAAGAACTAGGTTCGTAGAGCCAGAATCTATTTCTACTCTTTCTGACCAAGATAAGTGTTTGTCATTTAGCAACGACAGGGCCTTGAATCCTAGTATTTCTGGAGCTGAACAAGTTTCTCAGTGTTCTACTCAAAGAGTGCATGGATTATCCACTTGTTCAGAAGAGAAGTTCTATGAACTATCTGTAGGTTGCGTCCATGACAAATACAAGAATGACAAATCAAAAGCCATAAAGTTCTCTACTGTTGAGAGAACACCAAGATTAAGAGCAGTTACAGTTTCTGCCACTTCCAAAAGGCAAACAATGGCACCGTCAAAGACAAACCATTCTGGTCCAAACCGTGATTCACTTCCAGTGTCTCGTGCATCATCTGGAAGGTTTGCCACACCACCAAGAGCCAAGGCCACAACAAACTTGTACACCAATGTTGGTTTCCTTGGAAGTGTGGACTCTCCTGACGTTTCTGTTAATGCACCACGAATTGACAAGATTGCAGAATTCCCAATGACATTTAGTGAGGATTCTTTTTTCCCCGTCGGTGGACTATCATCAACATCAGCTCGCTGCTTTTCTAGCTCAGCAGGGAGCACCGCTTACTGCTCCATCACAAAGGACAAGTGTACAATCAGGGAGGACAAAGTTACTGTACCCACCAGTGTCAGTGATAATTTCCCTGGTCCGAAGGGCACTACTGAATGCCCTTCTGAGCATGTCAAAGCTTGTGCTTCAAGCCGTTCTGCTGCTGAGTTGGATCAACGTCGGTTTGACACCTCATCATACCAACAACGTGCAGAGGCATTAGAGGGGTTGCTGGAGTTCAGTGCCAAGCTCCTACAACAGCAGAGGTTTGATGAGCTTGGGGTGTTGCTGAAGCCATTCGGGCCTGAGAAGGTTTCTCCTAGGGAAACAGCTATTTGGTTGACCAAGAGCTTTAAGGAAACTGTGGTCTAAGGTTTTCTTTTCATGAACATGTATGATCATTGCTAACGGATAGTGTACATAACGATGACGTTGTATATTGGTGATAGAATAATGAAGAGTGGCTTTTATTGGTGTTGGCATTTTCCATGAGATGTAGACGTACTGTACTGGGCAACGGGCATGCAACATATATATAGAATAATACTACACAAGTTGCTTATGCTCCTTTCAGTTGCCAAAAAAAAC 2397 0.4113 DAKCSFLRTATANFSVTFPNCVFHVLNSVFTFHNWEIYMYHVQTKHLIIPDLVLQESARAVNYYHRIVTCGRTSGIASSTEIPSGAENWFFNSSVVDRLRKYEILEQIGKGAFGSALLVKHKHEKKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAIKKANGVNFAEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKDRDIRLGDFGLAKMLTSDDLASSVSDISKILLCSLFSALCFLNQLFFVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDIQSLINKINKCIVAPLPTMYSTAFRGLVKSMLRKNPELRPTAAELLNHPHLQPYIHKIHLKLNSPTRTTFPFQWPESNYLRRTRFVEPESISTLSDQDKCLSFSNDRALNPSISGAEQVSQCSTQRVHGLSTCSEEKFYELSVGCVHDKYKNDKSKAIKFSTVERTPRLRAVTVSATSKRQTMAPSKTNHSGPNRDSLPVSRASSGRFATPPRAKATTNLYTNVGFLGSVDSPDVSVNAPRIDKIAEFPMTFSEDSFFPVGGLSSTSARCFSSSAGSTAYCSITKDKCTIREDKVTVPTSVSDNFPGPKGTTECPSEHVKACASSRSAAELDQRRFDTSSYQQRAEALEGLLEFSAKLLQQQRFDELGVLLKPFGPEKVSPRETAIWLTKSFKETVV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00994 726 SMART serkin_6 102 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00994 726 FunFam Serine/threonine-protein kinase Nek2 99 181 - -
Pste5g00994 726 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Pste5g00994 726 ProSiteProfiles Protein kinase domain profile. 102 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00994 726 Pfam Protein kinase domain 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00994 726 Gene3D Phosphorylase Kinase; domain 1 78 181 - -
Pste5g00994 726 MobiDBLite consensus disorder prediction 503 533 - -
Pste5g00994 726 CDD STKc_Nek 101 380 - -
Pste5g00994 726 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 100 682 - -
Pste5g00994 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Pste5g00994 726 SUPERFAMILY Protein kinase-like (PK-like) 87 421 IPR011009 -
Pste5g00994 726 Gene3D Transferase(Phosphotransferase) domain 1 182 397 - -
Pste5g00994 726 MobiDBLite consensus disorder prediction 503 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00994 Pste-Chr5 6521247 6529183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00994 108 411 MAP Kinase Kinase Kinase AT1G53570 27.778 6.62e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pste5g00994 Pkinase 2.3e-59 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00994 5 6521247 6529183 Pste5g00994 5 6521247 6529183 ECH
Pste5g00994 5 6521247 6529183 Pste4g02136 4 15601441 15607558 PCT