Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00973 TGTTCTCCTTCCCATCCCATCCTATCCCTCGTTCCTCCTGGCTTCCCTTTCCCCCAATGCTGTAATTCTCATTCTCTTCTCTTCCCACATTTCCCTTCTATTTAACCTAATCACCCTTCTCTTTCTCTTCCTCATTTTCATCCCTTCAACTTAATATGTAGCCCAACCCTTTCCTCCTTCTTGATTTCCTATGAATTATCTTCCTCTTTCTCCACACCCCATTCAACCTGCTTCATTCTTCACTCCCTTTTCTTCATTGGGTTTCATTGCAAATTCTGTTGAATGCATCTGATTTCTGTTCCCAACCAAGACCATACCCTGAGTCCACAGTGGTTTGGAGATTTGGGGTTTGGAGTTTGAAGGTGTTGGTGTTGGTTTTGCTGTGATTTTGTTGAGACATGAATCGTAGAGTGAGGAGGAAGGTGGCCAGGAAAAGCAAAGGGAATGTGGTGCAATCTAGTTTCCCTGAAGTTCAAGATGAGGTTTTGGATTTGGAATACCAAAGGCAGGGAGTTGTTGATTGGAAGTGCTTGCCAGATGATACAGTAATTCAGCTGTTGTCATGTCTGAGTTATCGAGATCGAGCTAGTTTGTCGTCAACTTGTAAGACATGGAGGTGTCTTGGTAGCTCCCCGTGTTTGTGGACTTCTCTGGATCTTCGTTCACATAGGTTTGATTCCAGCATGGCTTTGTCACTAGCTCCCAGGTGTGGGCATCTTCAGAAGCTCAGGTTTCGCGGAGTAGAGTCTGCTGATTCAATAATTCATCTCCGAGCTAGGAACTTGCGTGAGTTAAGTGGTGACTATTGCAGGAAGATTACTGATGCAACCCTTTCGGTGATTGTGGCTCGGCATGAGTTACTTGAGAGCCTTCAGCTTGGACCAGATTTCTGTGAGAGAATAAGTAGCGATGCTATTAAAGCAATAGCTCATTGCTGTCCTAAATTGAATAAACTTAGACTCTCGGGTATTAGGGATGTAAATGCTGATGCTATTAATACCTTGGCTAAGCATTGCCCAAAGTTGACTGATATAGGGTTCATTGACTGTCTGAATGTTGATGAGGTTGCACTGGGAAATTTGTTATCAGTTCGTTTCCTTTCTGTTGCGGGGACATCAAGTATGAAGTGGGGTGTTGTTTCCCATCTTTGGCATAAACTACCTAACCTGATTGGGTTAGATGTTTCAAGAACTGATATTGGACCATCTGCTGTTTTCAGAATGTTATCCTTATCACAGAATTTGAGAGTTTTGATTGCTTTGAATTGTCCTATCCTTGAAGAAGATACTAGCTTTTCTGCTAGCAAATATAAAAACAAGTTATTAATTTCCCTTCGTACTGATATTTTTAAAGGACTGGCTTCTTTATTTTTTGATAATACAAAGAGAGGAAAAAATGTGTTTTTGGACTGGAGGACTGCAAAGAACAACGGTAAGGACCTTAATGAAATTATACCCTGGCTTGAGTGGATGCTATCCCATACACTTCTGCGTTCTGCTGAGAGTCCCCAACAGGGTCTTGACAATTTCTGGGTTGAGCAAGGTGGAGCACTTTTGCTTAGTCTAATGCAGAGTTCCCAAGAGGATGTGCAAGAGAGGGCAGCTACAGGTCTTGCAACTTTTGTTGTAATAGATGATGAAAATGCTAGCATAGATTATCGAAGGGCTGAAGCTGTTATGCGAGATGGAGGTATACGTCTCCTACTCGGCCTTGCAAAATCTTGGAGGGAAGGACTTCAATCTGAAGCAGCTAAGGCCATTGCAAATTTATCCGTCAATGCCAATGTGGCCAAAGCTGTTGCAGAAGAGGGTGGGATTGAGATTCTTGCTGGTTTGGCTAGGTCAATGAACAAGTTGGTGGCTGAAGAGGCTGCTGGTGGACTATGGAATCTCTCTGTTGGAGAAGAACACAAGGGTGCCATTGCTGAAGCTGGAGGAATACAAGCTTTAGTGGATCTTATTTTCAAGTGGTCCTCTAGTGGAGATGGAGTTTTAGAACGTGCGGCGGGTGCATTGGCTAATTTAGCAGCTGATGACAAGTGTAGTACTGAGGTTGCCCTGGCAGGAGGTGTACATGCTCTGGTGATGCTTGCACGCAACTGCAAATTTGAGGGAGTTCAAGAGCAGGCTGCTCGTGCATTGGCTAACTTAGCTGCTCATGGAGATAGTAATAGTAACAATGCAGCTGTTGGACAAGAAGCAGGTGCTCTTGAAGCTCTTGTTCAACTTACTCGTTCTCCCCATGAAGGTGTCAGGCAAGAGGCTGCTGGGGCCCTTTGGAATTTGTCATTTGATGATAGAAATCGAGAAGCCATTGCTGCTGCAGGTGGAGTTCAGGCCTTGGTTGCTCTGGCCCAAGCTTGTTCTAATGCCTCCCCTGGACTTCAAGAGAGGGCTGCTGGTGCTCTGTGGGGATTGTCAGTCTCAGAAACCAATAGTGTTGCCATCGGACGAGAAGGAGGTGTTGCACCTCTGATTGCACTTGCACGGTCTGAAGCAGAGGATGTTCATGAAACTGCTGCAGGAGCACTGTGGAATCTTGCTTTCAATGCTAGTAATGCTCTACGAATAGTAGAGGAAGGTGGAGTATCTGCACTTGTTGATCTGTGTTCTTCATCAGTATCAAAAATGGCTCGATTCATGGCTGCATTGGCATTGGCTTACATGTTTGACGGGAGAATGGATGAATATGCTTTAGTAGGCACTCCATCTGAAAGCATTTCAAATTCTAAGAGTGTGAGCTTGGATGGAGCTAGAAGGATGGCTTTGAAACATATTGAAGCTTTTGTCCTTATGTTCTCTGATCCACAAGCATTTGCGGCTGCTGCTGCATCATCTGCTCCTGCAGCATTAGCACAGGTTACTGAAGGTGCACGTATTCAAGAAGCAGGACATCTAAGATGCAGTGGTGCTGAAATTGGTAGATTCATCACTATGCTACGAAATCCGTCATCTATACTCAAGGCTTGTGCGGCATTTGCTCTTCTCCAGTTCACAATTCCTGGTGGACGACATGCCATCCACCATGCTAGCCTCATGCAGGGCTTGGGAGCACCAAGAGTTCTGCGTGGTGCTGCTGCAGCAGCAACCGCCCCGCTTGAAGCAAAAATATTTGCTAGAATTGTTCTTCGCAATCTTGAGTATCACCAGACAGAACATACAGTGTAGATCAGTTCATTTGTTGTTTACAGTCTTCTTTCTCAAATCATTTTGAACTTGTAATATTTCACATGTACACAAACTGCCCAAAGTGTCATAAGAACACTACTCAGTGACCGTGATGCATGTGATGTGAAGCAAGTTATAAATTGCAGGTTCTATTTTTCAACTTTGGAACTGCTTTGAAAACAGTTCTTGTTTCAAGATGTATTTCCTCCCCCCTTGTACCAATCTTTTCATATCCAGGCTACAACTGATAGGCACATTGACATAAATTTTATTGCCTTGAT 3448 0.4408 MNRRVRRKVARKSKGNVVQSSFPEVQDEVLDLEYQRQGVVDWKCLPDDTVIQLLSCLSYRDRASLSSTCKTWRCLGSSPCLWTSLDLRSHRFDSSMALSLAPRCGHLQKLRFRGVESADSIIHLRARNLRELSGDYCRKITDATLSVIVARHELLESLQLGPDFCERISSDAIKAIAHCCPKLNKLRLSGIRDVNADAINTLAKHCPKLTDIGFIDCLNVDEVALGNLLSVRFLSVAGTSSMKWGVVSHLWHKLPNLIGLDVSRTDIGPSAVFRMLSLSQNLRVLIALNCPILEEDTSFSASKYKNKLLISLRTDIFKGLASLFFDNTKRGKNVFLDWRTAKNNGKDLNEIIPWLEWMLSHTLLRSAESPQQGLDNFWVEQGGALLLSLMQSSQEDVQERAATGLATFVVIDDENASIDYRRAEAVMRDGGIRLLLGLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARNCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQACSNASPGLQERAAGALWGLSVSETNSVAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNASNALRIVEEGGVSALVDLCSSSVSKMARFMAALALAYMFDGRMDEYALVGTPSESISNSKSVSLDGARRMALKHIEAFVLMFSDPQAFAAAAASSAPAALAQVTEGARIQEAGHLRCSGAEIGRFITMLRNPSSILKACAAFALLQFTIPGGRHAIHHASLMQGLGAPRVLRGAAAAATAPLEAKIFARIVLRNLEYHQTEHTV 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00973 922 SMART fbox_2 45 85 IPR001810 GO:0005515
Pste5g00973 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 687 729 IPR000225 GO:0005515
Pste5g00973 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 471 513 IPR000225 GO:0005515
Pste5g00973 922 PANTHER PROTEIN ARABIDILLO 1 1 919 - -
Pste5g00973 922 SUPERFAMILY ARM repeat 371 746 IPR016024 -
Pste5g00973 922 Pfam F-box-like 43 88 IPR001810 GO:0005515
Pste5g00973 922 CDD F-box_AtADLO1-like 41 82 - -
Pste5g00973 922 Gene3D - 683 920 IPR011989 -
Pste5g00973 922 Gene3D - 504 592 IPR011989 -
Pste5g00973 922 Gene3D - 593 682 IPR011989 -
Pste5g00973 922 SMART arm_5 717 758 IPR000225 GO:0005515
Pste5g00973 922 SMART arm_5 460 500 IPR000225 GO:0005515
Pste5g00973 922 SMART arm_5 676 716 IPR000225 GO:0005515
Pste5g00973 922 SMART arm_5 419 459 IPR000225 GO:0005515
Pste5g00973 922 SMART arm_5 632 675 IPR000225 GO:0005515
Pste5g00973 922 SMART arm_5 501 544 IPR000225 GO:0005515
Pste5g00973 922 SMART arm_5 545 586 IPR000225 GO:0005515
Pste5g00973 922 SMART arm_5 591 631 IPR000225 GO:0005515
Pste5g00973 922 SMART LRR_CC_2 126 151 IPR006553 -
Pste5g00973 922 SMART LRR_CC_2 180 205 IPR006553 -
Pste5g00973 922 SMART LRR_CC_2 206 231 IPR006553 -
Pste5g00973 922 FunFam Protein ARABIDILLO 2 357 504 - -
Pste5g00973 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 512 557 IPR000225 GO:0005515
Pste5g00973 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 602 644 IPR000225 GO:0005515
Pste5g00973 922 Pfam Armadillo/beta-catenin-like repeat 594 630 IPR000225 GO:0005515
Pste5g00973 922 Pfam Armadillo/beta-catenin-like repeat 465 499 IPR000225 GO:0005515
Pste5g00973 922 Pfam Armadillo/beta-catenin-like repeat 632 674 IPR000225 GO:0005515
Pste5g00973 922 Pfam Armadillo/beta-catenin-like repeat 679 715 IPR000225 GO:0005515
Pste5g00973 922 Pfam Armadillo/beta-catenin-like repeat 502 544 IPR000225 GO:0005515
Pste5g00973 922 Pfam Armadillo/beta-catenin-like repeat 555 586 IPR000225 GO:0005515
Pste5g00973 922 Pfam Armadillo/beta-catenin-like repeat 424 458 IPR000225 GO:0005515
Pste5g00973 922 SUPERFAMILY RNI-like 42 295 - -
Pste5g00973 922 Gene3D - 361 503 IPR011989 -
Pste5g00973 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 556 587 IPR000225 GO:0005515
Pste5g00973 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 430 472 IPR000225 GO:0005515
Pste5g00973 922 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 643 688 IPR000225 GO:0005515
Pste5g00973 922 Gene3D Ribonuclease Inhibitor 35 314 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00973 573 760 U-box Gene Family AT2G23140 35.450 4.02e-20 94.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00973 5 6372315 6384505 Pste5g00973 5 6372315 6384505 ECH