Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00966 TTGAAGTCGGGCCACATGAAATAGTACTAGTGAATTATTTACTATCTATTAAATATTTTGATATTTGTAAATAAGGGTTGGTTTGAATGAAGTTCCTTTTTCACAATCTTTGTTGAATTTGCTACCAACGTATAGAGGTAGCAGTGACTGGACCAAATCCATCAAACTATAAAACTCACTTTGTTTCTTCTCATTTTCGCGCTAATTTTTGGTTCTGCGCCATGAGAATTGCTTCCTCGTCCTCCGCCTCCGCTTATTCGCGATTCTGCTCCTCGGCGCTTCGATCCAAGCGCCTCGTGTCACCGGCGGAGAAGGCCGCCCGCGACAGCTCCGACCTCGGCCTCTCCCGCCGCCTCGGCGTCCTCGACCTCTTACTCCTCGGAATTGGCGCCTCCATCGGTGCTGGCATCTTCGTCGTCACCGGCACGGTAGCCCGCGACGCCGGACCAGGAGTAACAATAAGTTTTATACTTGCTGGAGCATCATGTGTTATCAATGCACTCTGTTATGCTGAGTTGGCATCTAGATTTCCTGCTGTTGTTGGTGGGGCATATCTATATGCATATACAGCGTTTAATGAACTTACGGCTTTTCTTGTTTTTGCACAATTAATGCTTGACTATCACATTGGGGCAGCTAGCATAGCAAGAAGCTTAGCAAGTTATCTGATAAATATTCTAGAACTCTTCCCTGTTTTCAAAGATAATATTCCAAAATGGATTGGACACGGTGAAGATATTGGAGATGTGCTATCCATCAATCTCTTAGCTCCAATTGTGCTAGTTATTCTTACTGTAATACTCTGTCAAGGTGTCCAGGAATCGTCTGTTGTTAATTCTCTTATGACAGTGACCAAGGTAATCATTGTTATCATTGTCATTTTTGCTGGAGCGTTTGAGGTTGACATTTCCAACTGGTCTCCCTTTGCTCCAAACGGTTTGCAGTCCATATTTACAGGAGCTACTGTGGTCTTCTTTGCGTATGTTGGATTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAGACCCCAGCGGGATTTGCCGATAGGCATAATAGGAAGCCTCTTAATATGTATTGCATTATATATTGGAGTATGCTTGGTGATTACTGGAATGGTTCCATACAAGCTTCTAGGAGAAGATGCTCCTTTGGCTGAAGCTTTTACGTCCAAGGGATTAAAATTTGTTTCTGTTCTGATTAGCATTGGTGCTGTTGCGGGACTTACAACAACACTCCTGGTTGGTCTCTATGTTCAGTCTCGGCTATATCTTGGGATTGGCAGGGATGGCTTATTACCCTCAATCTTTGCTAAAGTCCACCCAAAACGCCACACCCCTGTTCATTCTCAGATCTGGGCTGGCTTGGTTGCCAGTGTTTTGGCTGGGCTGTTTAACGTGCATGTGCTCTCTCACATTCTTTCTGTTGGTACATTGACTGGCTATTCGTTAGTCTCAGCTTGTGTTGTTGTACTTCGCTGGAAGGATAAGACAAATAGTCAAGTGTCATCTTCTGCTGAGCGGGAAGGCATAATTTGCCTTGTTGCTGTTGCTCTTTGTGGATTTGCTACTGGGATCTTATACCGTTTTGAAGCTTCATTAATTTTTCTGATTCTGGCTATAGTTATTGCAGCTGGTGCTTCTGTTGCTCTTGTTTTCCGTCAGGTATATGCAGATGCACCAGGGTTTTCATGCCCCGGGGTTCCCATCCTGCCAAATGTTTGCATATTTTTTAACATGTTCTTATTTGCTCAGTTACACTATGAAGCATGGGTGAGATTTGTGATTCTATGTGTTGTCATGGTTGGTGTTTATGCAATATATGGTCAGTATCATGCTAACCCCAGTGCAGAAGAGAATGTCTATCACCAAGCACGAGTGGAAGAAGCTCTATGAGTCATCTATTCAATATTATACAATGTGTTTCTTTATTTTTGACCCACTGGGGGTTGGTTAAAAATGTATTTAGTAAATTAGCTATTGTTAGTTCTCTGATAGGATGTCCATTTTGTATGACTACCTTGCTATACTTGCTACTAGATTGTCTATGATATGGTCAGGTAGCATGTATATGATGTATCTCTTATTTGCTACTTCATGAAAAAGAAAAATTATCGTGTATCTTGTCCGAATTCTAATTTCATACTTTCGGATACGATCAAGCCCATGATTTTGTAACTTTCCAAAAGGAAG 2192 0.4224 MRIASSSSASAYSRFCSSALRSKRLVSPAEKAARDSSDLGLSRRLGVLDLLLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPKWIGHGEDIGDVLSINLLAPIVLVILTVILCQGVQESSVVNSLMTVTKVIIVIIVIFAGAFEVDISNWSPFAPNGLQSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICIALYIGVCLVITGMVPYKLLGEDAPLAEAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGIGRDGLLPSIFAKVHPKRHTPVHSQIWAGLVASVLAGLFNVHVLSHILSVGTLTGYSLVSACVVVLRWKDKTNSQVSSSAEREGIICLVAVALCGFATGILYRFEASLIFLILAIVIAAGASVALVFRQVYADAPGFSCPGVPILPNVCIFFNMFLFAQLHYEAWVRFVILCVVMVGVYAIYGQYHANPSAEENVYHQARVEEAL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00966 557 PIRSF AA_transporter 29 557 - -
Pste5g00966 557 Pfam Amino acid permease 45 450 IPR002293 GO:0016020|GO:0022857|GO:0055085
Pste5g00966 557 Gene3D Amino acid/polyamine transporter I 41 486 - -
Pste5g00966 557 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 36 538 - -
Pste5g00966 557 Pfam C-terminus of AA_permease 489 538 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00966 Pste-Chr5 6345274 6350718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00966 7 482 Organic Solute Cotransporters AT1G05940 71.310 0.0 671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00966 5 6345274 6350718 Pste5g00966 5 6345274 6350718 ECH
Pste9g00406 9 1954591 1956240 Pste5g00966 5 6345274 6350718 PCT