Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00940 ATGCAACTGTTCAGACCCAAACCTGCACCTCCCAGTCCCATCTCATCCTCAAACTTCAACAACATCACCATGACACAACAAAACCCATTTCCCAGCCTGGGACCCGAACCTGCTGACTTGGCCACCGCTTTTGCCTCCCAACGCTTCTTCTTCACATCCCCAGGCCGATCCAACTCCATAGTGGAATCCACCAACAATACCGATGCCGATTGCACCACTTCCTCCTCTTCGCCGTCGGTGACAACGCGGGGCAAGATTGTGCTGAACGACAGCGTTGCGGTGATGACCTACTCGCCGAACCCCTACGCTGACTTCCGGCGCTCCATGGAGGAGATGGTGGCGGCGCGTCCGGAGTTGATGGACGTGGCGTCCAATTGGCGTGACCTGCATGAGCTTCTTATCGGCTATCTTGCTCTCAACCCCAAGAGCACGCACCAGTTCATTCTCAATGCCTTTTATGATCTTCTCGTCCACCTCGTCTCCGCTTCCGCTTCCGCTTCCGCTTGA 507 0.5582 MQLFRPKPAPPSPISSSNFNNITMTQQNPFPSLGPEPADLATAFASQRFFFTSPGRSNSIVESTNNTDADCTTSSSSPSVTTRGKIVLNDSVAVMTYSPNPYADFRRSMEEMVAARPELMDVASNWRDLHELLIGYLALNPKSTHQFILNAFYDLLVHLVSASASASA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00940 168 MobiDBLite consensus disorder prediction 1 37 - -
Pste5g00940 168 Pfam Transcriptional repressor, ovate 98 159 IPR006458 -
Pste5g00940 168 ProSiteProfiles OVATE domain profile. 94 158 IPR006458 -
Pste5g00940 168 NCBIfam uncharacterized plant-specific domain TIGR01568 92 160 IPR006458 -
Pste5g00940 168 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 25 160 IPR038933 GO:0045892
Pste5g00940 168 MobiDBLite consensus disorder prediction 14 32 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste5g00940 Ovate 2.8e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00940 5 6161275 6161781 Pste5g00940 5 6161275 6161781 ECH